KEGG   Variovorax paradoxus S110: Vapar_4235Help
Entry
Vapar_4235        CDS       T00916                                 

Definition
pyridoxal-5'-phosphate-dependent protein subunit beta
Orthology
K01733  
threonine synthase [EC:4.2.3.1]
Organism
vap  Variovorax paradoxus S110
Pathway
Glycine, serine and threonine metabolism
Vitamin B6 metabolism
Metabolic pathways
Microbial metabolism in diverse environments
Biosynthesis of amino acids
Module
Threonine biosynthesis, aspartate => homoserine => threonine
Class
Metabolism; Overview; Biosynthesis of amino acids [PATH:vap01230]
Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:vap00260]
Metabolism; Metabolism of cofactors and vitamins; Vitamin B6 metabolism [PATH:vap00750]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
1:complement(4477169..4478368)
Genome map
AA seq 399 aa AA seqDB search
MPAPVIHFKLASASEPSGTARPRPPRPLKNPRLQGFRCLRCDAPYPLTLANDGCPACRGM
GVHVGLHASYLPGGDSPVPMPYAPGFTLGEGGTPLLDMPELAHEFGVARLALKDESCNPT
GSHKDRMTAVGVAQALDFGAHTLVLASSGNAAVSAAHYAWAAGLGCEVATYEGLPAAYAR
QLDALGARRHAFADNAGRWAFVRERSQHPGYFALTNYRLPALGSAPLAIEGYKPIALECL
AEGGLPDHLVIPTARGDLAWGIYAGFRDLLAAGRISRLPRLWLVEPFARLSRVLAGGALD
GAYPGHTAQFSTAGSTVTFLQWQAAVASGGGAVVVGDEQARAARQKLTAAGVSAELCAAA
GLDALRQLREGNAIAADAHVVLMLTANASRDPSWPDRAA
NT seq 1200 nt NT seq  +upstreamnt  +downstreamnt
atgcctgcgcccgtcatccacttcaagctcgcctcggcttccgagccgtccggcaccgcg
cgaccccgtccgccgcgcccgctgaaaaacccccgcctgcagggttttcggtgcctgcgc
tgcgatgccccctatccgctgacgctggcgaacgacggctgcccggcctgccgcggcatg
ggcgtccatgtcgggctgcacgcgagctacctgccgggcggcgacagccccgtgcccatg
ccctacgcgccgggcttcacgctgggcgagggcggcacgccgctgctcgacatgccggaa
ttggcgcacgaattcggcgtggcgcggctcgcgctcaaggacgaatcgtgcaaccccacg
ggctcccacaaggaccgcatgaccgcggtgggcgtggcccaggcgctggacttcggcgcc
cacacgctggtgctggcctcatcgggcaatgccgcggtctcggcggcgcactatgcatgg
gctgcggggctgggctgcgaagtggccacttacgaaggcctgcccgccgcctacgcgcgg
cagctcgatgcgctgggcgcgcggcgccacgcctttgccgacaacgccggccgctgggcc
ttcgtgcgcgagcgctcgcagcatccgggctatttcgcgctgaccaattaccgcctgccc
gccctgggcagcgcgccgctcgcgatcgagggctacaagcccatcgccctggagtgcctg
gccgagggcggcctgcccgaccacctcgtgattcccacggcgcgcggcgacctggcctgg
ggcatctacgcgggctttcgagacctgctggccgccgggcgcatttcgcggctgccgcgg
ctctggctggtggagccttttgcgcgcctctcgcgcgtgctggccggcggggcgctcgac
ggcgcatatcccggccacaccgcgcagttttccaccgccggctccaccgtgaccttcctg
cagtggcaggcggccgtcgcctcgggcggcggcgcggtggtggtgggcgacgagcaggcc
cgcgcggcccggcaaaagctcacggcggccggcgtgagcgccgaactgtgcgcggcggcc
gggctcgacgcgctgcgccagctgcgcgagggcaacgcgattgccgccgacgcccacgtg
gtgctgatgctcaccgccaacgcctcgcgcgacccgagctggcccgaccgggccgcctga

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