KEGG   Variovorax paradoxus S110: Vapar_4743
Entry
Vapar_4743        CDS       T00916                                 
Name
(GenBank) glycyl-tRNA synthetase, beta subunit
  KO
K01879  glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
Organism
vap  Variovorax paradoxus S110
Pathway
vap00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:vap00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Vapar_4743
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:vap01007]
    Vapar_4743
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vap03016]
    Vapar_4743
Enzymes [BR:vap01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.14  glycine---tRNA ligase
     Vapar_4743
Amino acid related enzymes [BR:vap01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   Vapar_4743
Transfer RNA biogenesis [BR:vap03016]
 Prokaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    Vapar_4743
SSDB
Motif
Pfam: tRNA_synt_2f DALR_1 DUF3150
Other DBs
NCBI-ProteinID: ACS21348
UniProt: C5CM89
Position
1:complement(5040462..5042600)
AA seq 712 aa
MTSVQKNLLVELFVEELPPKALKKLGDAFAGVLRDQLVAQGLAEPASVLTAYASPRRLAA
HLTHVAERAADKAVSQKLMPVAVGLDASGQPTPALLKRLAALGADASAVPGLKRAMDGKA
EALFYESTAKGATLAEGLQKALAEAIAKLPIPKVMSYQLESGCELPGWSSVSFVRPAHGL
VALHGDAVVPVEALGLQAGRETHGHRFEAAVDPVVLRDANSYALQMQDEGAVIASFEARR
TEIARQLAAAAVRVGGAAVPIHDDALLDEVTALVERPNVLVCSFEREFLEVPQECLILTM
KANQKYFPLLDASNRLTNKFLVVSNISPEDASAVVGGNERVVRPRLADAKFFFDQDRKKS
LASRVESLGKVVYHNKLGTQGERVERVMRIARGIAEKLGGAALVAHAVQAAQLAKADLVT
DMVGEFPELQGTMGRYYALHDGLAAEVADAIEDHYKPRFAGDELPRNSVGLVVALADKLE
TLVGMFGIGNLPTGDRDPFALRRHALGVIRMLIEKDLPLKLDALLQDAAAQFKDIDGFDT
GKATAELQDFILDRLAGSLREQGASAQEVDAVLAPRPQRLGEVPKLLAAVRAFAALPAAA
ALAAANKRIGNILKKAPEADAHVSELLLKEPAEKALHAAMAEVVPAANAQFDAGDYTASL
QTLAALREPVDAFFDGVMVNAEQADLRLNRLGLLMSLHAAMNRVAQLERLAA
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgacgagcgtgcaaaagaacctgttggtcgaactcttcgtcgaagagctgccgcccaag
gccctgaagaaactcggcgatgccttcgccggcgtgctgcgcgaccagctcgtggcccag
gggctcgccgagcccgcctcggtgctcacggcctacgcgtcgccgcgccgcctcgctgcg
cacctcacgcacgtggccgagcgcgccgccgacaaggccgtctcgcaaaagctcatgccc
gtggccgtggggctcgacgcctcgggccagcccacgcccgccttgctgaagcgcctggcc
gcgctgggcgccgacgcctcggccgtgcctggcctgaagcgcgcgatggacggcaaggcc
gaagcgctgttctacgaaagcaccgccaagggcgcaacgctggctgaaggcctgcagaag
gcgctggccgaggccattgccaagctgccgattcccaaggtgatgagctaccagctcgaa
agcggctgcgagctgcccggctggagcagcgtgagcttcgtgcgccccgcgcatggcctg
gtggcgctgcatggcgatgccgtggtgccagtcgaggcgcttggcctccaggccggccgc
gagacccacggccaccgcttcgaggcggccgtcgatccggtcgtgctgcgcgacgccaac
agctatgcgctgcagatgcaggacgagggcgcggtcatcgcgagcttcgaagcgcgccgc
accgagatcgcgcgccagctcgcggccgcggccgtgcgggtcggcggcgctgccgtgccc
atccatgacgacgcgctgctcgacgaagtgaccgcgctggtcgagcggcccaacgtgctg
gtctgcagcttcgagcgcgaattcctcgaagtgccgcaggagtgcctcatcctcacgatg
aaggccaaccagaagtactttccgctgctggacgcctcgaaccggctcaccaacaagttc
ctggtggtcagcaacatcagcccggaagatgcgagcgcggtggtcggcggcaacgagcgc
gtggtgcgtccgcgcctggccgacgccaagttcttcttcgaccaggaccgcaagaagtcg
ctggcctcgcgcgtcgaatcgctgggcaaggtggtctatcacaacaagctcggcacccag
ggcgagcgcgtcgaacgcgtgatgcgcattgcgcgcggcatcgccgaaaagctcggcggc
gccgcgctcgtcgcgcatgcggtgcaggccgcgcagctggccaaggccgacctcgtgacc
gacatggtcggcgagttcccggagctgcagggcaccatgggccgctactacgcgctgcac
gacggcctcgctgccgaagtggccgacgcgatcgaagaccactacaagccgcgctttgcc
ggcgacgagctgccgcgcaacagcgtgggcctggtggtcgcactggccgacaagctcgag
acgctggtcggcatgttcggcatcggcaacctgcccaccggcgaccgcgatcccttcgcg
ctgcgccgccatgcgctcggcgtgatccgcatgctgatcgagaaagacctgccgctgaag
ctcgacgcgctgctgcaggacgccgccgcgcagttcaaggacatcgacggcttcgacacc
ggcaaggccacggccgagctgcaggacttcatcctcgaccgcctggccggcagcctgcgc
gagcagggcgccagcgcgcaggaagtcgacgccgtgctggcgccgcggccgcagcgcctg
ggcgaggtgcccaagctgctggcggccgtgcgcgcctttgccgcgctgccagccgccgcc
gcgctggccgccgccaacaagcgcatcggcaacatcctcaagaaggcgcccgaggccgac
gcgcacgtcagcgagctgctgctgaaggagcccgccgagaaggcgctgcatgccgccatg
gccgaggtcgtgcccgccgccaatgcccagttcgatgccggcgactacaccgcttcgctg
cagaccctggccgcgctgcgcgagccggtcgatgccttcttcgacggcgtgatggtcaat
gccgagcaggccgacctgcgcctgaaccggctgggcctgctgatgtcgctgcacgccgcg
atgaaccgcgtggcgcagctcgagcggctggctgcttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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