KEGG T00916: Vapar

Variovorax paradoxus S110: Vapar_5367

Entry

Vapar_5367 CDS T00916

Definition

acetate/CoA ligase

Orthology

K01895

acetyl-CoA synthetase [EC:6.2.1.1]

Organism

vap Variovorax paradoxus S110

Pathway

vap00010	Glycolysis / Gluconeogenesis
vap00620	Pyruvate metabolism
vap00640	Propanoate metabolism
vap00680	Methane metabolism
vap01100	Metabolic pathways
vap01110	Biosynthesis of secondary metabolites
vap01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Glycolysis / Gluconeogenesis [PATH:vap00010]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:vap00620]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:vap00640]
Metabolism; Energy metabolism; Methane metabolism [PATH:vap00680]

SSDB

Motif

Pfam:

AMP-binding AMP-binding_C DUF1967

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2:complement(73233..75200)

AA seq 655 aa
MSSNEAASPLIPAPDMKDAHVYGMGAYEKLVAEAEADHSGYWSRLAREFLGWKTPFTRGL
DDSQAPFFKWFEDGTLNVSWNCLDRQVERGLGDKTAIIFEADDGQVTRTSYRELLARTCR
MANALKARGVKKGDRVVIYMSMSIEGVVAMQACARIGATHSVVFGGFSAQSLRDRIQDAG
AVMVVTADEQVRGGKPLPLKAIVDEAIALGGCESVKNVVVYRRTGGPIGWVPSRDRWLHE
ETQGQPETCEPEWVGAEHPLFVLYTSGSTGKPKGVQHSSGGYLLHAALTTQWTFDLKPAD
VFWCTADIGWVTGHTYIAYGPLALGATEVVFEGVPTYPDAGRFWKMIQDHKVSVFYTAPT
AIRSLIKAAEGNEAVHPRRYDLSSLRILGSVGEPINPAAWEWFHQHVGGGRCPIVDTFWQ
TETGGHMITPLPGATPLVPGSCTLPFPGIAAAIVDETGADVPNGQGGILVVKKPWPSMIR
TIWGDPERFKASYYPPELKGFYLAGDGAIRDAKTGYFTITGRIDDVLNVSGHRMGTMEIE
SALVSCTALVAEAAVVGRPDDTTGEAICAFVVLKRARPTGDEAKKIANELRNWVAKEIGP
IAKPKDIRFGDNLPKTRSGKIMRRLLRSVAKDEPITQDTSTLENPAILAQLSERN

NT seq 1968 nt +upstreamnt +downstreamnt
gtgagcagcaacgaagcagcaagccctctcattccagccccggacatgaaggacgcccat
gtgtacggcatgggcgcctatgaaaaactggtggccgaggcagaggccgaccacagcggc
tactggtcgcgcctcgcgcgcgagttcctgggctggaaaacgccgttcacccgggggctc
gacgacagccaggcgcccttcttcaagtggttcgaggacggcacgctgaacgtgtcctgg
aactgcctcgaccgccaggtcgagcgcggcctgggcgacaagaccgcgatcatcttcgag
gccgacgacggacaggtcacgcggaccagctaccgcgagctgctcgcgcgcacctgccgc
atggccaatgcactgaaggcgcgcggcgtgaaaaagggcgaccgcgtcgtcatctacatg
tcgatgagcatcgaaggcgtggtcgcgatgcaggcctgcgcgcgcatcggcgccacgcat
tcggtggtgttcggcggcttctcggcgcagagcctgcgcgaccgcatccaggatgccggc
gccgtgatggtcgtcaccgccgacgaacaggtgcgcggcggcaagccgctgccgctcaag
gccatcgtcgacgaagccatcgcgctgggcggctgcgagagcgtgaagaatgtcgtcgtc
taccgccgcaccggcgggccgatcggctgggtgccctcgcgcgaccgctggctgcatgaa
gagacgcaaggccagcccgagacctgcgagcccgaatgggtgggcgccgagcatccgctg
ttcgtgctctacacctccggctcgaccggcaagcccaagggcgtgcagcattccagcggc
ggctacctgctgcatgcggcgctgacgacccagtggaccttcgacctgaagcccgccgac
gtgttctggtgcaccgccgatatcggctgggtcacgggccatacctacatcgcctacggt
ccgctcgcgctgggcgccaccgaagtggtgttcgagggcgtccccacctaccccgacgcg
ggccgcttctggaagatgatccaggaccacaaggtgagcgtgttctacaccgcgcccacg
gccatccgctcgctgatcaaggcggccgaaggcaacgaagccgtgcacccccggcgctac
gacctgtcgagcctgcgcatcctgggctcggtcggcgagccgatcaatccggcggcctgg
gagtggttccaccagcacgtcggcggcggccgctgtccgatcgtcgacactttctggcag
acggagaccggcggccacatgatcacgccactgcctggcgccacgccgctggtgccgggt
tcctgcaccctgcccttccccggcatcgcggcggccatcgtcgacgagaccggcgccgac
gtgccaaacggccaaggcggcatcctcgtggtgaagaagccctggccgagcatgatccgc
accatctggggcgacccggagcgcttcaaggccagctactacccgccggaactcaagggc
ttctacctcgcgggcgacggcgccatccgcgatgcgaagaccggctatttcacgatcacc
ggccgcatcgacgacgtgctcaatgtctcgggccaccgcatgggcacgatggagatcgaa
tcggcgctggtgtcgtgcaccgcgctcgtggccgaagccgcggtggtcggccgtcccgac
gacaccaccggcgaggcgatctgcgccttcgtcgtgctcaagcgcgcgcgccccacggga
gacgaagcgaagaagatcgcgaacgagctgcgcaactgggtcgcaaaagagatcggtccg
atcgccaagcccaaggacatccgctttggcgacaacctgcccaagacgcgcagcggcaag
atcatgcgccgcctgctgcgctcggtggccaaggacgagccgatcacgcaggacacgtcg
acgctggagaacccggccatcctggcgcagctgtcggagcggaactga

All links

Pathway (7)   
   KEGG PATHWAY (7)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-VAP (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (34)   

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