KEGG   Vigna angularis (adzuki bean): 108327919
Entry
108327919         CDS       T04660                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03020  RNA polymerase
var03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108327919
  09124 Replication and repair
   03420 Nucleotide excision repair
    108327919
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:var03021]
    108327919
   03400 DNA repair and recombination proteins [BR:var03400]
    108327919
Transcription machinery [BR:var03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     108327919
  RNA polymerase III system
   RNA polymerase III
     108327919
  RNA polymerase I system
   RNA polymerase I
     108327919
DNA repair and recombination proteins [BR:var03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      108327919
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 108327919
NCBI-ProteinID: XP_017417138
UniProt: A0A0L9U7D1
Position
3:30256020..30260295
AA seq 234 aa
MAAEYGFELARVGGEGEEQEEVKGCLSKFIDDGSVESHRYYLSRRTTLEMLRDRGYSIPS
SEIDLSLSQFRHMHGHSPDPDRLRLSLTHATNPSKRILVIFCGPGSVKVTAIRNIAGQIV
NRDTLGGLILIVENHVTSQALKAVDLFPFKVEIFQITDLLVNITKHVLKPKHQVLTDRQK
KNLLKKFNIEEKQLPRMLKSDAIARYYGLERGQVVKVTYSGEITQMHVTYRCVW
NT seq 705 nt   +upstreamnt  +downstreamnt
atggcagctgagtacgggttcgaattggcgagagtgggaggagaaggagaagaacaagaa
gaagtgaaagggtgtttgagcaagttcatcgatgatggcagcgttgaaagtcacagatac
tacttgtctcgcagaaccactttggaaatgctcagagacagaggctactccattccctcc
agcgaaatcgacctttctctctctcaattccgccacatgcatggtcattcccctgaccct
gaccgtctccgcctctccctcactcacgccaccaacccttccaaaaggattttagtcatt
ttctgcgggccaggttctgtgaaagttactgccattcggaacattgcggggcagattgtt
aatagagacactttgggtggtcttatattgatagtggagaatcatgttactagccaggcc
ttgaaagccgttgatctttttcccttcaaggttgaaattttccagatcacagatttgctt
gttaatattacaaagcatgtgttgaagccaaagcatcaggtgctgactgataggcagaag
aaaaatctcctgaagaagttcaatatagaagaaaagcagcttccccgcatgctaaagagt
gatgcaattgcacgatattatggacttgagaggggccaagtagttaaagttacctatagt
ggtgaaatcacccagatgcatgtcacatatcgatgtgtgtggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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