KEGG   Vigna angularis (adzuki bean): 108336313
Entry
108336313         CDS       T04660                                 
Name
(RefSeq) exosome complex component RRP43-like
  KO
K12586  exosome complex component RRP43
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108336313
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:var03019]
    108336313
Messenger RNA biogenesis [BR:var03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     108336313
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 108336313
NCBI-ProteinID: XP_017428216
Position
7:complement(22505807..22520905)
AA seq 301 aa
MGLPKSSEDLSSEMEVDAFRRLFPLRYFERHLAESIRPDGRALGKSRETSIFLGAVSTAN
GSALVKIGSTTMLTAIKMEVMTPSLESPNEGCLAVDFFMPPICSPIVRPGRPAEASPVVS
KQLSDTISSSRMIDLKELSLVSGKAAWMTYLDIYCLDADGALFDAALLSAVAALSHLQIP
AVAMNDDGKIVLVSNEDGQNQTQEPVNKEKRKLTLRSIPFSLTCILHKNYIVADPTAEEE
SIVETHLTIVLDASGQLISLYKTGGPVLAYPSTIQDCVALTRQRVKEVKGLLDKENSAME
V
NT seq 906 nt   +upstreamnt  +downstreamnt
atgggattaccaaagtcttctgaggacttgtcatcggagatggaggttgatgcctttaga
cgccttttcccacttcgttattttgagcgtcatcttgcagaatcaataaggcctgatggt
agggcacttggaaaaagcagagaaacaagtatttttcttggtgctgtttcgactgctaat
gggtcagctctagtgaagattggatcaactactatgttgactgctattaaaatggaggtt
atgacaccctccttggagtcaccaaatgagggctgtctagctgttgatttcttcatgcct
ccaatttgttctccaattgttaggcctggcaggcctgctgaagcatcaccagtggtgtca
aagcagttgtctgacaccatttcaagttctagaatgattgatttgaaagaattgtctctg
gttagtggaaaagctgcatggatgacttacttggatatctattgtttggatgctgatggt
gctctttttgatgctgcattactttctgctgttgctgctttatctcatttgcaaattcct
gctgttgccatgaatgatgatggcaagatagtacttgtgtctaatgaagatggacaaaac
caaacacaggagccagtcaataaggaaaagaggaagcttacattaagaagcattccgttc
tcattaacatgcatacttcacaagaattacatcgtggcagatcctaccgcagaagaagaa
tccattgtggaaacccatttgacaatagttttggatgcatctggccaactaatatctctt
tacaagactggtgggccggttcttgcctatccttctactatccaggattgtgtagcgtta
acccggcaaagagtaaaggaagtaaaaggcctcttagacaaagaaaattctgctatggaa
gtttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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