KEGG   Vigna angularis (adzuki bean): 108337974
Entry
108337974         CDS       T04660                                 
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108337974
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:var03041]
    108337974
Spliceosome [BR:var03041]
 Complex C
  Other components
   Step II factors
    108337974
SSDB
Motif
Pfam: OB_NTP_bind HA2_C S1 HA2_N Helicase_C DEAD AAA_22 AAA_19 nSTAND3 ABC_tran AAA_30 T2SSE TsaE Sigma54_activ_2 AAA_16 PhoH Flavi_DEAD
Other DBs
NCBI-GeneID: 108337974
NCBI-ProteinID: XP_017430057
UniProt: A0A0L9V312
Position
7:38901286..38908531
AA seq 1201 aa
MAVDNPEDGLKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRSSENVEEFDAKLKE
NGAEMPDYFVRTLLTIIHAILPPKPKDLKKEKETVNGKTKFKALAIADDRDRAKELRQEM
ESEAREKQSEQIEEDDGYRDRDRRDRRRDRYDEDDRRDHRRRGRDRDDEDDRRDYGRRGR
DRDRDDEDDRRDYSRRGRDKYDKDRDRDGDRYERRRRDDNEENGRGRENGDRDGNRKATR
HVSGEPELYAVYKGRVSRVMETGCFVQLEDIRGKEGLVHVSQMATRRITNAKDVIKRDQE
VYVKVISVSGQKLSLSMRDVDQHTGKDLLPLKKSSEDDALRMNPQGSRDGPVTRTGLSGI
RIVEEDDVGSSRRPLKRMSSPERWEAKQLIASGVMSVSEYPTYDEEGDGLLYQEEGAEEE
LEIELNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKERREVREQQQRT
MLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLS
IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQ
PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLS
QYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCNIFTI
PGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERM
KGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDP
GFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTI
PEIQRINLGMTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLG
RKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQ
PEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAG
KNFTKVRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMT
TKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRR
A
NT seq 3606 nt   +upstreamnt  +downstreamnt
atggcggtagataatcctgaggatggattgaagaagttggaatatttgtctcttgtgtcg
aaggtgtgcaccgagttggagtcccacaccggcaccggcgacaaagttctggcggagttc
atcactgagttgggtcggtcgtcggagaatgttgaggaatttgacgcgaaattgaaggag
aatggtgcggaaatgccggattactttgtccgaacgctcctcactattattcacgcgatt
ctccctcccaagccgaaggatttgaaaaaggagaaagagactgtcaacggcaagaccaag
ttcaaggctctggccatcgcagacgatagggaccgggccaaggagcttcggcaggagatg
gaatctgaggcaagggagaagcagagtgagcaaattgaggaagatgatgggtacagagac
agagatagaagagataggcgcagagataggtatgatgaagatgatagaagagatcatcgc
agaagaggaagagacagagatgatgaagatgatagaagggattacggcagaagaggtaga
gacagagatagagacgatgaagatgatagaagggattacagccgaagaggaagagataaa
tatgataaggatagagatagggatggtgacaggtatgagaggcgcaggagagatgataat
gaagagaatggtcgtggaagggagaatggagatagagatggtaataggaaggctacacgg
catgtttctggtgaacctgaattatatgccgtttacaaagggagggtgtccagggtaatg
gaaactgggtgctttgtccagttagaagacataagagggaaggaggggttggtccatgtg
tcacagatggccactcggaggatcacaaatgccaaagacgtcattaagcgcgaccaggag
gtttatgtaaaggtgatctcagtttccggtcagaagttgtctctttccatgagggacgtt
gatcagcacacaggtaaggatctccttccgttgaagaagagctccgaggacgatgccttg
aggatgaatccgcagggttcaagggatggaccggttaccaggacaggtctttcaggtatc
aggattgtagaagaagacgatgttggttcttcacggagacctctgaagagaatgagctca
ccggagagatgggaagcaaaacagttgattgcttcaggtgtgatgagtgtttcagagtat
ccaacttatgacgaggagggagatggattgctgtaccaagaggaaggagctgaggaggag
cttgagattgagttgaatgaggatgaacccgcattcttgcaagggcagagcagatactca
atggatatgtctcctgttaagatttttaagaatcctgaaggttctctgggtcgagctgct
gcacttcagtctgcacttataaaggagcgtagggaagtgcgagaacagcaacaacggaca
atgcttgattcaattccaaaggatctgaatcggccttgggaagaccctatgccagagtca
ggtgaaaggcatcttgcccaggagcttaggggtgttggtttatcagcctatgatatgcca
gaatggaagaaggatgcatatgggaaaacaattacctttgggcaaaggtcgaagctttct
attcaagaacagaggcagagtttgccaatttacaagttaaaaaaagaattgattcaggct
gtgcatgataatcaggtgttggttgttattggagaaactggttcgggtaagactactcag
gtcacacagtatcttgccgaagcaggttataccacaaaaggaaaaattggatgtactcaa
cctcgtagggtggctgcaatgtctgttgcaaagagagtagcagaagagtttggttgtaga
ttgggagaagaagttggttatgccattcggtttgaggattgcactggaccagatactgtt
atcaagtacatgacagatggtatgcttcttagggaaatattggtcgatgagaatctgtca
cagtattctgttataatgcttgacgaagcccatgaaagaactattcatactgatgttctt
tttggactgctcaagcagctagtgaagcgaagacccgaattgcgattgattgtcacttct
gctactctggacgctgagaaattttcaggatatttctttaactgtaacatctttacaatt
cctggtagaacttttcctgttgagatactttatactaaacagccggaaagtgattattta
gatgcatctttaataactgtcctacagatacacttgactgagcccgagggagacattctt
ctctttttgactgggcaagaggagattgattttgcttgccaatctctatacgagagaatg
aagggattaggtaagaatgttccagagctgatcattttaccggtttatagtgcccttcct
agtgaaatgcagtctaggatatttgatcctgctcctccagggaaaaggaaagtggtcgtg
gctactaacattgctgaggcttctttgactattgatgggatattttatgtaattgatcct
ggatttgctaagcaaaatgtttataacccaaagcaaggtcttgattctttggtaataact
ccaatttcacaagcatcagccaaacaaagagctggacgtgcagggcgtactggacctggg
aagtgttatcgcctttataccgagagtgcatacaggaatgagatgtctcccactacaatt
cctgagattcaaaggataaatctggggatgactacacttaatatgaaagcaatggggata
aatgatctactgtcctttgattttatggatccaccatcacctcaagcactgatttctgcc
atggagcagctttacagtcttggagcattggatgaagagggccttctgaccaaattgggg
aggaaaatggcagaatttcctttggatccacctttgtccaagatgttgcttgccagcgtc
gaccttggatgcagtgatgagattttgaccataattgccatgatccagactggtaatatt
ttctacaggccaagggaaaagcaagcccaagcagatcagaagagggcaaagtttttccag
ccagagggtgatcatctgacactacttgctgtttatgaggcttggaaagccaagaatttt
tctgggccctggtgttttgagaattttgtgcaatctagatcgttgagaagagcacaggat
gtcaggaaacaactgctcaccattatggataagtacaaattggatgttgtaagtgctgga
aaaaacttcaccaaagtaaggaaggctatcactgctggattcttttttcacgctgccaga
aaggatccccaggaaggatacagaactctagttgagaaccaacctgtgtatatccatcca
agttctgctttgttccagaggcagccagactgggtcatataccatgagcttgtgatgaca
actaaggagtatatgcgtgaggtcactgtcatagaccccaaatggcttgttgagctggct
ccaagatttttcaaagtagcagatcctacaaagatgagcaagcggaagcgtcaagagcga
attgagccactttatgatagataccacgagccaaattcatggcgtttgagtaaacgtcgt
gcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (17)   
   Pfam (17)   
All databases (35)   

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