KEGG   Vigna angularis (adzuki bean): 108341095
Entry
108341095         CDS       T04660                                 
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9
  KO
K13117  ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
Organism
var  Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:var00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:var03041]
    108341095
Enzymes [BR:var01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     108341095
Spliceosome [BR:var03041]
 Complex C
  Other components
   Complex C specific factors
    108341095
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C AAA_22 DEAD HA2_N AAA_19 AAA_30 AAA_7 AAA_23 ResIII T2SSE nSTAND3 AAA_29 AAA_11
Other DBs
NCBI-GeneID: 108341095
NCBI-ProteinID: XP_017434210
UniProt: A0A0L9VF86
Position
9:complement(28585863..28596459)
AA seq 699 aa
MSQFWKPGTERPQGRVVDDEEGGLLFLFGSHHSSSAKHGYASIEKQRQRLPVFKYRTAIL
YLVETHATTIIVGETGSGKTTQIPQYLKEAGWATGGRLIACTQPRRLAVQAVASRVAEEM
GVKLGEEVGYTIRFEDVTKPDVTVLKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSIS
TDILLGLLKKIQRRRPELRLIISSATIEAKSMSDFFQMRKKRRETENKDHGPQVEPAILS
VEGRGFNVQINYAEEPVQDYVQAAVSTTLLIHERESAGDVLVFLTGQDDIDAAVQLLTDQ
VQTTGKHSSGLIVLPLYSGLPRADQELVFSPAPRGKRKVVISTNIAETSLTLEGIVYVVD
SGFSKQRFYNPISDIENLVVAPISRASARQRAGRAGRVRPGKCYRLYTEEYFLNHMPNAG
IPEIQRSNMVSCVIQLKALGIDNILGFDWPASPSAEAMIRALEVLYSLGILDDDAKLTSP
TGFQVAEIPLDPMVSKMIIASSQLGCSEEIITIAAVLSVQSIWISGRGIQKESDEAKLRF
AAAEGDHVTFLNVYKGFHQSGKSSQWCHKNYVNYHAMRKVLEVREQLKRIAKRIGLVLKS
CESDMQLVRKAVIAGFFANACHLEAYSHDGMYKTLRGSQEVYIHPSSVLFRVNPKWVIYH
SLVSTDRQYMRNVLTIDPSCLMDAAPHFYKLQQSNHLLF
NT seq 2100 nt   +upstreamnt  +downstreamnt
atgtcgcagttctggaaaccagggacggagaggccacagggtcgcgtagtcgacgatgaa
gaaggtggtcttctcttcttgtttggttctcaccattcctcttccgcaaaacatggctac
gccagcatcgagaagcaacgccagcgattgcctgtgttcaagtaccgcaccgccattctc
taccttgtcgagactcacgccaccaccatcatcgttggcgaaaccggcagcggaaaaacc
actcaaattcctcagtacctgaaagaagcaggttgggccaccggtggcagactcattgct
tgcactcaacctagaagacttgccgttcaggctgttgcttccagagttgccgaagagatg
ggagtaaagctcggtgaagaagttggctacacgataaggtttgaagatgtaacgaaaccg
gatgtaacggtacttaaatttttaactgatggagtgctcctaagggaaatgatggacgat
cctcttttgaccaaatatagtgttataatggtggatgaagctcatgaaagatcaatatca
acagacattttgcttggactattgaaaaagattcaacgtcgtcgaccagagttgcggttg
attatctcatctgctactattgaagcaaagtcgatgtctgacttcttccaaatgagaaag
aagcgccgagagactgaaaacaaggatcatggaccacaagtggaacctgcaatcttgtca
gttgagggtagaggattcaatgtacaaattaattatgctgaggaacctgtccaagactac
gttcaggctgctgtttcaacgacactcttgatccatgagcgggagtcagcaggagacgtt
ctagtgttccttactggccaagatgacattgatgcagctgttcagttactcactgaccaa
gttcaaactactggaaaacactcttctggattaattgttttgcctctgtattcagggctt
ccacgtgctgatcaggagttagtgttttctccagctcctcgtggaaagaggaaagtagta
atttctactaatatagcagaaacatcactcacattagagggaattgtctatgttgttgac
agtgggttttctaaacagcggttctacaatccgatttctgatattgaaaatctggttgtg
gctccaatatctagggcttctgctagacaaagagctggtagggctgggcgagttcgacct
ggaaagtgttacaggctatacacagaagaatattttcttaaccacatgcctaatgcggga
attccagagatacagcgatcaaatatggtctcctgcgtaatccagctaaaggccttgggg
attgataatatcttgggctttgactggccagcatctccatctgctgaagcaatgatccga
gcactagaagttctctactcacttggtatattggatgatgatgctaagctgacttcacca
actggatttcaagttgctgagattccacttgatccgatggtctcaaaaatgataatagct
tccagtcaacttgggtgttcagaggagataatcaccattgctgctgttctttccgtccaa
tccatctggatctcagggagagggatacaaaaggaatctgatgaagcaaaattgagattt
gctgctgcggagggtgaccatgtaacgttccttaatgtatacaaggggtttcatcaatct
ggtaaatcttcacagtggtgtcacaagaactatgtaaactatcatgccatgagaaaggtt
cttgaagttagagagcaactcaaaagaattgcaaagaggataggactagtcttgaaatct
tgtgagagtgatatgcagttagtgagaaaagctgtcatcgccgggttttttgcaaatgcg
tgtcatctagaggcatacagtcatgatgggatgtataagacgttaagaggatcacaggag
gtttatattcacccgtcgtcagtgctattcagagtaaatccaaaatgggttatttaccat
tctcttgtatcaactgatcgacaatacatgcgtaatgtcttaactatagacccctcgtgc
ttaatggatgctgctcctcacttctacaagttgcaacaatctaatcatctccttttttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (15)   
   Pfam (15)   
All databases (30)   

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