KEGG   Vigna angularis (adzuki bean): 108345627
Entry
108345627         CDS       T04660                                 
Name
(RefSeq) protein RRP6-like 2
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108345627
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:var03019]
    108345627
Messenger RNA biogenesis [BR:var03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     108345627
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC PMC2NT RRP7
Other DBs
NCBI-GeneID: 108345627
NCBI-ProteinID: XP_017439746
UniProt: A0A8T0JXM3
Position
10:complement(28811612..28825721)
AA seq 876 aa
MDVDNDQPSAAAAKAQALQTLAAGPLSSSVAKLAASSRCLPSNKDFHFYRNFEEFKVPVE
EIARESRSMLEAIGAAAHAAFPADVDDAYDWLVNVNDDVLERFDASMDEFRRHREEDKTG
HSAKHPMEEDGFQLVSRKKKGVRGNVIPGTGSEASPATPGVTVATKDKKTMGSKPKVPFH
IPTIRRPQDEYSIVVNNANMPFEHVWLQSSDDGTRFIHPLEMLSVLDFVDRNPGDVVPMK
PPSIDNTPFKLVEEVKDLKELAARLRSVNEFSVDLEHNQYRSFQGLTCLMQISTRAEDFV
VDTLKLRIHIGPYLRDVFKDPSKKKVMHGADRDILWLQRDFGIYVCNLFDTHQASKLLGL
ERNSLEYILYHFCEVTANKDYQNAEWRLRPLPDEMLRYAREDTHYLLYIYDLMRIKLFAL
SKESESSESTDTPLVEVYKRSYDVCMQLYEKELLTENSYLHIYGLQGAGFNAQQLAIVSG
LCEWRDIVARAEDESTGYVLPNKSVLEIAKQIPLTTSKLRRLVKSKHPYVEHNLDTVVSI
IRHSIQNAAAFEEASQLLKEAQAAAALDVVPVIDGTEVPQFHKQDSKETSLHQDTNVQIK
IKSSSLTSEPARVSVTVSEQDRDANVGALSPEKGNRTTVQVLKKPPGAFGAFLGNSASKR
KLGPDKGKEDIKLEHIRSSVSLPFHSFLGSSEKSEPTVETPSVASEMLEPTKPVSDIVSA
SPLDEIIMLESDTGAESMELNNLENYNVRMEKNSGVFTSEKEDKEPVSLMELSSNFKKCF
HSNDQNNKTRQHGKTEQSSGVVQLKAFDYEAARKHVEFGEHTKHASSRDCGEVEVSDSKQ
RSTIGQEQASNSTKQLQQGKRRQAFPASGNRSATFR
NT seq 2631 nt   +upstreamnt  +downstreamnt
atggacgtggacaacgatcaaccttccgccgcggcggcgaaggcccaggcgctgcagacc
ctagcagcgggtcctctctcctcatcggtggcaaagctcgccgcgtcctcgcgctgcctc
ccttccaacaaggacttccacttctaccgaaacttcgaggagtttaaggtccctgtcgag
gaaatcgcgcgggagtcgcggtcgatgctggaggccatcggagcagcggcgcacgcagcg
tttcctgccgacgtcgacgacgcctatgactggcttgtgaacgtgaacgatgatgttctg
gagcggtttgatgcatccatggacgagttccggaggcatcgggaggaggataaaactggg
cattcggcgaagcacccaatggaggaggatgggtttcagctggtttctaggaagaagaaa
ggggtaagagggaatgtgattccagggacgggttctgaggcgagtccggcgacacctgga
gtcactgtggcgactaaggataagaagacgatgggatccaagcccaaggttccgtttcat
attccaactataaggagaccgcaggatgagtatagtatagtggttaataatgcaaacatg
ccttttgagcatgtgtggttgcagagtagtgacgatgggacaaggttcattcatccgctg
gaaatgctctctgttttggattttgttgatagaaatcctggggatgttgtgccaatgaag
cctccctcaatagataacactcctttcaagcttgtggaagaagtaaaagatttaaaggag
ttggctgctaggctgcgttctgtgaatgaattttcggttgatttggaacataatcaatat
cggtcttttcaaggtttgacttgccttatgcaaatctcgacaagggctgaagattttgtt
gttgacacattgaaacttcgcattcatataggaccctatctcagggatgttttcaaggac
ccttccaagaaaaaggtcatgcatggtgcggatcgtgatattttatggcttcaacgagac
tttggaatttacgtttgtaacttgtttgacactcaccaggcttcaaagttgttaggcttg
gagagaaatagtttggagtatattctgtaccatttttgtgaagttactgcaaacaaagat
taccagaatgcagagtggaggctacgtccacttcctgatgagatgctaagatatgctagg
gaagatacacactatctgttatatatatatgatttaatgaggattaagttatttgccttg
tctaaggagtctgaaagttctgagtctactgatactcctctggtggaggtctacaagcga
agttatgatgtctgcatgcagctctatgagaaagaacttttgacagagaactcctatctt
catatatatgggttgcaaggagctggtttcaatgctcagcagcttgccatcgtttctgga
ctgtgtgaatggagagacattgtagcccgagcagaggatgagagtacaggatatgtattg
ccaaataaatctgttcttgaaatcgctaagcagattcctcttactacaagcaaactaagg
cgattagtgaagtcaaagcacccttatgttgaacacaatcttgatacagtagtcagcatc
attagacattctattcaaaatgctgctgcatttgaggaagcatctcaactgttgaaagaa
gcacaagctgccgctgcattagatgtggtaccagttattgatggaactgaagtcccccaa
ttccataaacaagattctaaggaaacttctctgcatcaagatacaaatgtacaaataaaa
atcaagtccagcagtcttacatctgagccagcaagggtcagtgtcacagtttcagagcag
gacagggatgcaaatgttggtgcactttctccggaaaagggaaatagaacgactgttcag
gtgcttaaaaaacctcctggtgcttttggggcatttctggggaattcagcttcaaagagg
aagcttggtcctgataagggaaaggaagatatcaagttagagcatattagatcttccgtt
agtcttcctttccattcatttttgggtagcagcgagaagtcagaacctacagtagaaact
cccagtgtagcgtctgaaatgttagagccaacaaaacctgtttctgatatagtttctgcc
tctcctcttgatgagattataatgctagaatctgatacgggtgcagagagtatggagctg
aataacctagaaaactacaatgtgcgcatggagaaaaattctggtgtgttcacatcggaa
aaagaggacaaagaaccagtgtctctcatggaattatcatcaaattttaagaaatgcttt
cactctaatgaccaaaataataaaaccagacagcacgggaaaactgaacagtccagtggc
gtggtgcagctgaaggcatttgattatgaagctgcaaggaagcatgtcgagtttggagaa
catacaaagcatgcatcttcccgggattgtggcgaggtagaggtctcagatagcaagcaa
cgttcgacaattggacaggaacaagctagtaattcgactaaacaattgcaacaaggtaaa
agacgtcaggcttttcctgcttctgggaatcgtagtgcgacatttcgctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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