KEGG   Variovorax boronicumulans: CKY39_03080
Entry
CKY39_03080       CDS       T05068                                 
Name
(GenBank) type VI secretion system tube protein Hcp
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
vbo  Variovorax boronicumulans
Pathway
vbo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vbo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CKY39_03080
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vbo02044]
    CKY39_03080
Secretion system [BR:vbo02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CKY39_03080
SSDB
Motif
Pfam: T6SS_HCP Serglycin
Other DBs
NCBI-ProteinID: ATA52317
UniProt: A0A250DD70
Position
complement(688491..688970)
AA seq 159 aa
MSSDFHIKLDGVKGESSHKDHKDEIEISSWSWNVSNASGAGSGGGSGKGKASPGEFNFTH
VYDKASPVLAKNCVSGKHFKDMVMTCRKSGEGQQEYLKVTLKEVFISSVGPGGAQGGDVH
EQVSCSFKDIEFAYKGQDDKGAGGGEVKFGWNVATTETR
NT seq 480 nt   +upstreamnt  +downstreamnt
atgtcatctgactttcacatcaagctcgacggcgtcaagggcgagtcttctcacaaggac
cacaaggacgagatcgagatttcgtcgtggtcctggaacgtgagcaacgcatcgggcgcg
ggatcgggcggcggttcgggcaagggcaaggcctcgccgggtgaattcaacttcacgcac
gtctacgacaaggcatcgcccgtgctcgccaagaactgcgtgagcggcaagcacttcaag
gacatggtcatgacctgccgcaagtcgggcgaaggtcagcaggagtacctgaaggtcacg
ctcaaggaagtcttcatctccagcgtgggccccggcggcgcacagggcggcgacgtgcac
gagcaggtgtcctgcagcttcaaggacatcgagttcgcctacaagggccaggacgacaag
ggcgccggcggcggcgaggtgaagttcggctggaacgtggccaccaccgaaacccgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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