KEGG   Vibrio campbellii: M892_09560Help
Entry
M892_09560        CDS       T02837                                 

Definition
5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
vca  Vibrio campbellii
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:vca00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    M892_09560
Enzymes [BR:vca01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     M892_09560
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     M892_09560
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
I:complement(2079011..2079820)
Genome map
AA seq 269 aa AA seqDB search
MPELPEVEVSRMGISPHMIGQTIKAFVFRTPKLRWDIPQKLKKLEGQVIRNISRRAKYLL
IETDEGTAIVHLGMSGSLRVLDADFPPAKHDHVDLKLTNGKILRYNDPRRFGAWLWSAPN
EPHAVLGHMGPEPLTEEFNADYVAEKAKGKRVAIKQFIMDNKIVVGVGNIYANESLFKSR
IHPTRPAGKLTKKEWQLLVENIKATLEIAIQQGGTTLKDFAQADGKPGYFAQELLVYGKA
GEPCPECGEALQEQKIGQRNTFFCGVCQK
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacctgaagttgaagtaagccgaatgggcatcagcccacatatgattggc
caaacgatcaaggcatttgtatttagaaccccgaaactgcgttgggatatcccgcaaaag
cttaaaaagctggaagggcaggtgattcggaatatcagtcgccgcgctaagtatctgttg
atagaaacggacgaaggaactgcgattgttcacttaggtatgtcgggttcactgcgtgtg
ttagatgctgattttcctccagcaaagcacgatcatgtggatctcaaactaactaatgga
aagatactgcgttacaacgatccacgtcgttttggcgcatggctgtggagtgcgcccaat
gagccacatgcagttttaggtcatatgggaccagagccattaactgaagagttcaacgcg
gactacgtagcagagaaagccaaaggtaagcgcgttgcgattaagcagttcatcatggac
aacaaaatcgttgttggagtcggaaatatctacgccaacgaatcattgtttaaatcacgt
attcatcccactcgccctgcaggtaagctaaccaagaaagagtggcaattgctggtggag
aacattaaagccacgctagagatcgctatacagcaaggcggaaccacactgaaagatttc
gcccaagctgatggcaagccaggttacttcgcacaagagctgttagtttacggaaaagcc
ggagagccatgcccagaatgcggcgaagctctccaagagcaaaagataggccaacgtaat
accttcttttgcggagtatgtcagaagtag

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