KEGG   Vibrio cholerae O1 2010EL-1786: Vch1786_I2299
Entry
Vch1786_I2299     CDS       T01650                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
vce  Vibrio cholerae O1 2010EL-1786
Pathway
vce03030  DNA replication
vce03410  Base excision repair
vce03420  Nucleotide excision repair
vce03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vce00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Vch1786_I2299
   03410 Base excision repair
    Vch1786_I2299
   03420 Nucleotide excision repair
    Vch1786_I2299
   03440 Homologous recombination
    Vch1786_I2299
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vce03032]
    Vch1786_I2299
   03400 DNA repair and recombination proteins [BR:vce03400]
    Vch1786_I2299
Enzymes [BR:vce01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Vch1786_I2299
DNA replication proteins [BR:vce03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Vch1786_I2299
DNA repair and recombination proteins [BR:vce03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Vch1786_I2299
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Vch1786_I2299
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_5 HHH
Other DBs
NCBI-ProteinID: AET27878
Position
1:complement(2448305..2451124)
AA seq 939 aa
MDNPSMAHIPDNPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMMRQFAS
DRMAVIFDAKGKTFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEAD
DVIGTLARQASQAGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPEL
IIDYLALMGDKVDNIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQK
LEENRGNAKLSYQLATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDGG
TGIVTADEQTKTSSVTVSTAATHAAAIPESPAAHIDRSQYQTILNEQDFQLWLEKLKQAE
LFAFDTETDNLDYMVANLVGMSFAVAEGEAAYLPVAHDYLDAPQQLERDWVIAQLKPLLE
DESKAKVGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQHSC
ISFEQVAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYREIE
MPLVPVLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSPKQLQTIL
FEQMKLPVLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKLKSTYTDKLPKMINP
STGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYSQIE
LRIMAHLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIYGMSA
FGLAKQLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEITS
RNAMRRKAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHDELVFEVK
ESSLSEIESKVQQLMESAAELAVPLVAEAGHGDNWEQAH
NT seq 2820 nt   +upstreamnt  +downstreamnt
ttggataatccttctatggctcatatacctgacaatccattgattttgatcgacggctcc
tcttacctttatcgcgcatttcatgcttacccgggcaccatgagtaatggtgaaatccca
accaacgccatctatggtgtggtaaacatgattcgcagcatgatgcgccagttcgcttcg
gatcgcatggcggtgatttttgatgccaagggaaaaaccttccgtgatgagatgtacgat
caatacaaggctcatcgtcctcctatgccagatgagttgcgctgtcaggttgaaccttta
caccaagttattcgcgctatgggtttaccgctgttggcgattgaaggtgtagaagctgac
gatgtgattggtacgttggcgcgccaagcctcacaagctggtatgcctgttttgatcagt
accggcgataaagatatggcgcagttggtggatgataatattaccctgatcaataccatg
accaacgtcgtgctggatcgcgaaggtgtgattgaaaaattcggtatcccgccagagctt
attatcgactacctcgccttgatgggtgataaagtggataacattccgggcgtacctggg
gtgggtgaaaaaaccgcgaccgcacttttgcaagggattggcggcttagaagcgctgtac
gccaacctcgataaaatcgctgctttaggcttccgtggctcaaaaaccatggcacaaaag
ctggaagagaaccgcggtaatgccaagctttcttatcaactcgccaccatcaaatgtgat
gtcgagcttgaggaatctccgcaaaccctgctaaagcaaacgccagatcgagatgcgttg
atgtcgctctacggtaagctcgcctttaaatcttggctgaccgaattgcttgatggtggt
acaggtattgtgacggcggacgagcaaacgaaaacctcttcagttactgtttcaaccgca
gcaactcatgcggctgcgattcctgaaagccctgcggcccacatcgatcgcagccagtat
caaaccatcctaaacgaacaagacttccagctttggttagagaagttaaaacaagccgag
ctgtttgcctttgatacggaaaccgacaaccttgattacatggtcgccaatttggtgggg
atgtcgtttgcagttgccgaaggtgaagcggcttatctgccagttgcgcacgattatctg
gatgcgccgcagcagttggagcgcgactgggtgattgcccagctaaaacctctgcttgaa
gatgaaagcaaagccaaagtgggccaaaacctcaaatacgatgcgagcgtgatggcgcgc
tacggcgttgagctgcgtggtattcgccatgacactatgctgcaatcctacgtctataac
agcgtgggcggcaaacatgatatggatagtttagcgctgcgttttttacagcacagctgt
atctcgtttgaacaagtggcaggtaagggtaagaaccagctcacctttaaccaaatcgct
ttagaagaagcggcacaatacgcggcagaagatgcggatgtgacgttgcgtctgcatcag
cgaattcatccgttgattgagcaagacgctaagcttgagcaagtgtatcgcgaaatcgaa
atgccgctggtacctgtgctatcacgtattgaacgtacgggcgtgatgatcgacgacatg
ctgctcagtgcccaatcgcaagaaattgcgttacgtttagatcaattagaacaaaatgct
tatgagttggcaggtcagccgttcaacttaagctcgccgaagcagctacaaaccattttg
tttgagcagatgaagctgcctgtcttgcaaaaaacgccatccggtaccccttcaaccaat
gaagaagtgttgcaagagctggctttggattacccactgcccaaggttctgattgagtac
cgcggtctggccaaactcaaatcgacctataccgataagttgccgaagatgattaaccca
agtacagggcgcgtgcatacttcctatcatcaagcagtgacggccactgggcgtctctcc
tccactgatcctaacttgcagaacattccagtgcgtaatgaagaaggacgccgtattcgc
caagcgtttgttgctccgcatggttggaaaatcatggcggtcgactactcgcaaatcgag
ctgcgcatcatggcgcacctgtcgggcgatcaggcgttattggatgctttccgtgatggg
aaagatatccatgcggcgacagcagcagaaatcattggtgtgccgattgatcaagtgagc
agtgagcagcgtcgccgagcgaaagcggtgaactttggtttgatctacggcatgagtgcg
tttggtctggcaaaacagctcggtattccacgcggtgaagcacaagagtatatggataaa
tactttgagcgttatcccggcgtgatgcagtacatggaagatacgcgtagccgtgctgca
caattgggttatgtcgaaaccatcttcggtcgtcgcttacatttgccggaaatcacctca
cgtaacgctatgcgtcgcaaagcggctgagcgggcagcgatcaacgcaccgatgcaaggc
accgcggcagacatcatcaaaaaagccatgttgttggtggatgagtggattgagcgggaa
ggtgatggccgagtcaaattgctgatgcaagtacacgatgaattggtctttgaagttaaa
gagtcatctttatccgaaattgaaagtaaagtacaacagctgatggagtcagcggccgag
cttgcagtacctttagtggccgaagccggccacggcgacaactgggagcaggcgcactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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