KEGG   Vibrio cholerae O1 El Tor FJ147: IR04_00060
Entry
IR04_00060        CDS       T03827                                 
Name
(GenBank) glycogen branching protein
  KO
K00700  1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
Organism
vcf  Vibrio cholerae O1 El Tor FJ147
Pathway
vcf00500  Starch and sucrose metabolism
vcf01100  Metabolic pathways
vcf01110  Biosynthesis of secondary metabolites
Module
vcf_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:vcf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00500 Starch and sucrose metabolism
    IR04_00060
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vcf04147]
    IR04_00060
Enzymes [BR:vcf01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.18  1,4-alpha-glucan branching enzyme
     IR04_00060
Exosome [BR:vcf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   IR04_00060
SSDB
Motif
Pfam: CBM_48 Alpha-amylase_C Alpha-amylase
Other DBs
NCBI-ProteinID: AJZ97654
Position
II:17196..19385
AA seq 729 aa
MKITKKPSKVQQFYDQLARAAFADPFSFLGPYIPAEQGALRVWMPGADNVALVVEGQARV
ALEREGEGGFVLKDGRNLRFTHYQLAVDWAGTEQLLDDPYQYHGLYAEYEDLHTPKQMYH
HMGAQFVTLERDGKMVSGVRFLVYAPHAAACSLIGAFNHWDGRRHPMQRLDYGIWGIFIP
GLPEGTQYKFELKGPHGEGLPHKADPWGFYAEQYPSFASVTYDHRRYQWQDTAWQQRPVT
EKRKQALSFYELHVGSWKRGENGEFLNYRELADQLVPYLVEMGYTHVELMPVAEHPFYGS
WGYQPVGLFAPTSRYGSPDDFKYFVDLCHQAGIGVVLDWVPAHFPSDSHGLANFDGTPLF
HDPDPRRGWHQDWNSYIYDLGREHVRRFLVANALYWFEMFHIDGIRVDAVASMLYLDYSR
SHDQWIPNVDGGRENYDAIATFKWMNEEVYKHFPNAMTIAEESTAFPGVSAPTFMGGLGF
GFKWNMGWMHDSLSYIKEDPVHRKYHHNTLTFPLIYAFSENYVLSLSHDEVVYGKRSLMY
KMPGDEWQQTANLRAYLGYMYGQPGKKLNFMGTELGQTAEWDHDGQLQWFLTQFERHAGI
QRLVRDLNHLYQAQTALHQLDCDPRGFEWRLQDNADLSVIAHERMDEAGNRVLVITNFTP
VPQQEFRLGVPKTGKYRLLLNTDAKQYNGSDYPVLQDVSTEAISSEGLDQSLLLSVPPLA
TLFYQWSAK
NT seq 2190 nt   +upstreamnt  +downstreamnt
ttgaagatcacaaaaaaaccatccaaggttcaacaattttatgatcagttggcgcgtgca
gcctttgctgatcccttttcatttctaggcccttacattcccgctgaacaaggtgcgctg
cgagtgtggatgccgggtgctgacaacgtcgcgttggtggttgaagggcaagctcgtgtg
gcgttagagcgtgaaggcgagggcggctttgtgctgaaagatggccgtaatctgcgtttt
acgcactaccaattggctgtcgattgggcgggtaccgagcagttactcgatgatccgtat
caatatcacggcctctacgctgaatatgaagatctgcatacgccaaagcagatgtatcac
catatgggggcgcagtttgtcaccctagagcgtgatggaaaaatggtctctggcgtacgt
tttctggtgtatgcccctcacgcggcggcgtgcagtttgattggcgcgtttaaccattgg
gatggtcgtcgccatccgatgcagcgtctcgattacggtatttggggaatttttatcccc
ggcttgccggaaggcacgcaatacaaatttgagctgaaaggcccacatggagaaggtctg
ccgcataaagcggatccgtggggtttttatgctgagcaatacccttcttttgcttctgtg
acttatgatcatcgtcgttatcagtggcaagatacggcttggcagcagcgccctgtgact
gaaaagcgtaaacaagcgctctcgttttatgagctgcacgttggctcatggaagcgaggc
gaaaacggtgaattcctcaattatcgtgaattggctgatcaattggtgccttatctggtt
gagatgggttatacccatgttgagttaatgcctgtcgctgagcacccattttatggttct
tggggctatcaaccggttggtctgtttgcgcccactagccgttacggctcgccggatgat
ttcaaatattttgttgatttgtgccaccaagcggggattggtgtggtgctcgattgggtg
cctgcgcacttcccatcagattctcacggtctggccaattttgatggcacgcccttattc
catgatccggatccacgtcgcggttggcatcaagactggaactcttacatctacgatctt
ggtcgcgagcatgtgcgccgtttcttagtcgctaatgcgctgtattggtttgagatgttc
catatcgatggcattcgtgttgatgcggtcgcatcgatgctctatctcgattattcgcgt
agccatgatcaatggatcccgaatgttgacggtggacgcgaaaactacgatgcgattgct
accttcaaatggatgaacgaggaggtatacaaacacttcccgaatgcgatgacgattgcc
gaagaatcgacggctttccccggtgtttctgccccgacctttatgggcggcctcgggttt
ggttttaagtggaacatgggctggatgcacgatagcttgtcgtacatcaaagaggatccg
gtgcatcgcaaataccaccacaataccctgactttcccgctgatttacgcgtttagtgaa
aactatgtgctctctttatcacacgatgaagtggtgtatggtaagcgctcacttatgtac
aaaatgccgggtgatgagtggcagcaaaccgccaacttacgcgcctacttgggttatatg
tatggtcagccgggcaaaaaactcaactttatgggtaccgaattaggacagactgcggag
tgggatcacgatggtcagttgcagtggttcttaacgcaatttgagcgccatgccgggatc
cagcgtttggtgcgcgatttgaaccatctgtaccaagcccaaacggcgttgcatcagctt
gattgcgatccgcgcggcttcgaatggcgcttacaagataatgccgatctcagcgtgatc
gctcatgaacggatggatgaagccggtaatcgtgtgttagtgatcaccaacttcacgcct
gttccacagcaggaatttcgcttaggcgttcctaaaacagggaagtaccgcttgttgctc
aataccgatgccaagcagtacaacggcagtgattatccggtattgcaggatgtgagtacg
gaagcgatcagcagtgaaggtttggatcaatcgctgctattgagtgtgccgccgctcgcg
acgctattttatcaatggagtgcgaagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (3)   
   KEGG MODULE (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (59)   

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