KEGG   Vibrio cholerae O1 El Tor FJ147: IR04_09180
Entry
IR04_09180        CDS       T03827                                 
Name
(GenBank) ribosomal RNA large subunit methyltransferase N
  KO
K06941  23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
Organism
vcf  Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:vcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vcf03009]
    IR04_09180
Enzymes [BR:vcf01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.192  23S rRNA (adenine2503-C2)-methyltransferase
     IR04_09180
Ribosome biogenesis [BR:vcf03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    IR04_09180
SSDB
Motif
Pfam: RlmN_N Radical_SAM Radical_SAM_2 Fer4_12
Other DBs
NCBI-ProteinID: AJZ99311
Position
I:892002..893123
AA seq 373 aa
MTTEKINLLDFDRKGLRTFFAEELGEKAFRAEQVMKWIYHFGCDDFDQMNNINKQLREKL
KAKCEIRAPYVSEAQHSADGTIKWAMRVGDQDVETVYIPEDDRATLCVSSQVGCALECKF
CSTAQQGFNRNLRVSEIIGQVWRAAREIGLEKETGRRPITNVVMMGMGEPLLNMKNLIPA
LEIMLDDLGFGLSKRRVTVSTSGVVSGLEQMIGQIDVALAISLHAPNDKLRSEIMPINDR
WNIEAFLEVVRRYIASSNANRGKVTVEYVLLDHVNDGTEHAHELAELLKGTPCKINLIPF
NPYPGSPYKKPSNSRIDRFQKTLMQYEHTVTIRKTRGDDIDAACGQLVGDVIDRTKRTKA
KQFDGQAIPVKTL
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgaccacagaaaaaatcaatctactcgattttgaccgcaagggtttgcgcacgtttttt
gccgaagaactgggtgagaaagcgtttcgtgccgagcaggtcatgaagtggatttatcac
tttggttgtgatgacttcgatcaaatgaataacatcaacaagcagctgcgtgaaaagctc
aaagccaagtgtgagatccgtgcaccttatgtctcggaagcgcaacactcggcggatggc
accatcaagtgggcaatgcgtgtgggtgatcaggatgtagaaacggtttacattcccgaa
gatgatcgcgcgaccttatgtgtatcttcccaagtagggtgtgcgttggaatgcaaattc
tgctcaacggcgcagcaaggttttaaccgtaacctacgcgtttcagaaatcattggtcag
gtttggcgtgcggcacgtgaaatcggtctagagaaagaaactgggcgtcgtcctatcact
aacgtggtgatgatgggcatgggtgagcctttgctcaacatgaaaaacctcatcccagcg
ttagagatcatgctcgatgatctcggttttggtctttctaagcgccgtgtgaccgtttct
acctctggtgtggtttctggtttagagcagatgattggccaaatcgatgtggctttggct
atctcattgcatgcgccgaatgacaagctgcgtagcgaaatcatgccgatcaacgatcgc
tggaatatcgaagcgtttttagaggtggtgcgtcgctatattgcatcctcaaatgctaac
cgcggtaaggtgaccgttgagtatgtgctgctggatcatgtgaacgatggtacagagcat
gctcacgagttggcggaattactgaaagggacgccttgtaaaattaacctgatcccgttt
aacccttatccgggctcaccctacaagaagccaagtaattcacgcatcgaccgtttccag
aaaaccttgatgcaatatgagcataccgtcaccattcgtaaaactcgtggtgatgacatt
gatgcggcatgtgggcagttggtgggagatgtcattgatcgcactaaacgaaccaaagct
aaacaatttgatggacaagcgattccagtgaaaacactgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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