KEGG   Vibrio cholerae O1 El Tor FJ147: IR04_11025
Entry
IR04_11025        CDS       T03827                                 
Name
(GenBank) pseudouridine synthase
  KO
K06181  23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
Organism
vcf  Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:vcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vcf03009]
    IR04_11025
Enzymes [BR:vcf01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.20  23S rRNA pseudouridine2457 synthase
     IR04_11025
Ribosome biogenesis [BR:vcf03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    IR04_11025
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AJZ99659
Position
I:complement(1291897..1292622)
AA seq 241 aa
MSSRLSSDATSSSSDQRKSHFKQRAAKNAGHPPTRANRKSVANKKKNATQTALSPKRPLS
PAERKVILFNKPYDTLSQFTDGDGRKTLADYIPIKDVYAAGRLDRDSEGLLILTNDGILQ
ARLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKVDIMPEPTLWPRNPP
VRFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNLGDLQPGEWREVT
L
NT seq 726 nt   +upstreamnt  +downstreamnt
atgtcatctcgcttgtccagcgatgccacctcctcttcttccgatcaacgaaagtcgcat
tttaaacaaagagccgcgaaaaacgctggccatccaccaacgagagcaaatcgaaagagt
gttgctaacaagaaaaaaaatgccactcaaacggctttgtcacctaagcgccccctttct
cctgctgagcgtaaagtgatcctgtttaataaaccttatgacactttaagccaatttacc
gatggggatggaagaaaaaccttggccgactacatcccaattaaggatgtttacgccgca
ggacgtttggatcgcgatagcgaaggactactgattttaaccaatgatggaattttgcag
gccagattgactcagccgcagtccaaagcgccaaaaacttactgggtgcaagttgaaggt
tcgccacaagagagcgaccttgaggcattgcgccacggagtgaccttaaaagatggcccg
actttaccggcgaaagtcgacatcatgcccgaacccacgctttggccacgcaatccgccg
gtgcgttttcgcgcagcaattccgaccacatggttagccattactttaatggaagggcgt
aatcgccaagtacgacgcatgacggcgcacatcggtttcccgactctacgcttgattcgt
tactccatgggcgattggaacttgggagatttgcagcccggtgagtggcgggaagtgacg
ctttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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