KEGG T03827: IR04

Vibrio cholerae O1 El Tor FJ147: IR04_18605

Entry

IR04_18605        CDS       T03827

Name

(GenBank) ATP-dependent DNA helicase RecG

K03655

ATP-dependent DNA helicase RecG [EC:5.6.2.4]

Organism

vcf Vibrio cholerae O1 El Tor FJ147

Pathway

vcf03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:vcf00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    IR04_18605
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcf03400]
    IR04_18605
Enzymes [BR:vcf01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     IR04_18605
DNA repair and recombination proteins [BR:vcf03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     IR04_18605

SSDB

Motif

Pfam:

DEAD Helicase_C RecG_wedge RecG_dom3_C tRNA_anti-codon ResIII AAA_30 SNF2-rel_dom SecA_DEAD SLFN-g3_helicase IstB_IS21 HHH_5 PhoH Cdd1 Helicase_RecD BrxC_BrxD nSTAND3 AbiEii Zot ERCC3_RAD25_C

Other DBs

NCBI-ProteinID:

AKA01092

Position

I:2967828..2969906

AA seq 692 aa
MSQLLSAVPLCELSGVGAKVAEKLEKVGLHTVQDLLFHLPLRYEDRTRVYPIVQLHHGLW
AAVQGKVMAVDTLFGKRKMLTVKISDGNGTLTLRFFNFTAAMKNNFAEGKFVHAYGEIKR
GNQGLEIIHPDYKFFTPAQTPDVEPNLTPVYPTTEGLRQLTLRNLTDQALVLLEKSAVQE
LLPSGLYDQQMTLAQALKIIHRPSADIDLRLFEQGRHPAQIRLIMEELLAQNLSMLAIRS
QGQQDVALPLAPVHQLKQQLLAQLPFSPTKAQQRVVAEIEADLAKPHPMMRLVQGDVGSG
KTLVAALAAVRAIEHGYQVALMAPTELLAEQHALNFAQWLEPMGIQVGWLAGKLKGKARE
TELARIASGEVKMVVGTHALFQEQVSFDHLALVIIDEQHRFGVHQRLELREKGAKQGAYP
HQLIMTATPIPRTLAMTAYADLETSVIDELPPGRTPIQTVAIPDTKRDEIVERIRHACLN
EGKQAYWVCTLIDESEVLEAQAAAETAEELQRKLPEVKIGLVHGRMKPAEKQAVMQAFKN
NELHLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGTVASHCVLLFHAP
LSKTAQKRLGVLRESNDGFVIAQRDLEIRGPGELLGTKQTGLADFKIADLVRDQQLVPQV
QRIARHIHERYPQNAQAIIDRWLGERDIYAKA

NT seq 2079 nt +upstreamnt +downstreamnt
atgtcacaactcctttcagccgttcctctttgtgaactctccggtgtcggggccaaagtc
gccgaaaaactggagaaagtcggtttgcacacggtgcaggatctgctgtttcatcttcca
ctgcgttatgaagatcgcactcgcgtttatccgatagtgcaactgcaccacggtttatgg
gccgcggtacaaggcaaagtgatggcagtggataccctgtttggcaaacgcaaaatgctc
accgtgaaaatcagtgatggcaacggtacactgacactgcgtttttttaacttcaccgcg
gcgatgaaaaacaactttgcggaaggcaaatttgtgcatgcctatggggaaatcaaacgc
ggtaatcaaggcttagagatcatccatcctgactacaaattctttacccctgcacaaacg
cccgatgttgagccaaacctgactccggtttacccaaccactgaaggactgcgccaactc
accctacgtaatttgactgaccaagcgttggtgctactggaaaaatctgcggtgcaggag
ttactgccatccggactttacgatcagcagatgaccttagcccaagcgctgaagatcatt
catcgcccatcggcggatatcgatttgcgcctgtttgaacaagggcgacatccggcgcaa
attcggctgatcatggaagagctgctggcgcaaaatctctctatgctcgcgattcgcagt
caaggccagcaagatgtggccttgccactggcacccgtccaccaactcaaacaacaactc
ttagcacagcttcccttttcaccgactaaggcgcagcagcgcgtggttgccgaaatcgaa
gccgatttagccaagccgcacccaatgatgcgcttagtgcaaggcgatgtcggctcaggc
aaaaccttagtcgcagcgcttgcggcagtgcgggcgattgagcatggctatcaagtagcc
ttgatggctcctaccgagctactggccgagcagcacgcgctcaattttgcgcagtggcta
gagccgatgggcattcaagtcggctggctcgcgggtaagctcaaaggcaaagcgcgggaa
acggagctggcacgcatcgccagtggcgaagtgaaaatggtggttggcacccatgctctg
tttcaagagcaagtgtcgtttgaccatcttgccttggtcattattgatgagcagcatcgc
ttcggggtacatcagcgtttagagctgcgcgagaaaggcgcaaaacaaggcgcgtacccg
catcagctcattatgactgctactccgatcccgcgtactttggcgatgacggcttatgcc
gatttggaaacctcagtgattgatgagttaccccccgggcgtactccgattcaaaccgta
gcgattccggataccaaacgcgatgagattgtcgagcgcattcgccacgcctgcctcaac
gaaggcaagcaagcgtattgggtgtgtactttgattgatgaatccgaagtgctggaagcg
caagcggccgcagaaacggccgaggaactgcaacgtaaactgcccgaagtcaaaatcggc
ttagtgcatggccggatgaaacccgccgaaaaacaagcggtaatgcaggcgtttaaaaac
aatgagctgcatctgctcgtcgccaccacagtgattgaagtgggcgtggatgtgcctaat
gccagcttgatgatcattgaaaaccccgaacgtttggggctagctcaacttcaccagcta
cgcggccgtgttgggcgtggtaccgtagccagccattgtgtgctgctgtttcatgcacca
ctctccaaaaccgcgcaaaagcgtttgggcgttttgcgtgaaagcaacgatggatttgtc
atcgcgcagcgcgacttggaaattcgcggccccggagagctattaggcaccaaacaaacc
ggcttagccgatttcaaaattgctgatctggtacgcgatcagcaactggttccgcaagtg
caacgcatcgcgcgacatatccatgaacgctacccacagaatgcacaagccatcatcgac
cgctggttaggcgagcgcgatatttacgccaaagcttag

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (29)   

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