KEGG V.cholerae: VC2209

Vibrio cholerae O1: VC2209

Entry

VC2209 CDS V.cholerae

Gene name vibF

Definition nonribosomal peptide synthetase VibF

Orthology K12237 nonribosomal peptide synthetase VibF

Pathway vch01053 Biosynthesis of siderophore group nonribosomal peptides

Class Metabolism; Biosynthesis of Polyketides and Nonribosomal Peptides;
Biosynthesis of siderophore group nonribosomal peptides
[PATH:vch01053]

SSDB

Motif Pfam: Condensation AMP-binding NRPS PP-binding
PROSITE: AMP_BINDING PHOSPHOPANTETHEINE ACP_DOMAIN

Other DBs NCBI-GI: 15642774
NCBI-GeneID: 2614958
JCVI-CMR: VC_2209

Position I:complement(join(2353407..2358194,2358194..2360647))

AA seq 2413 aa
MKEMTAMQAAYWLGRQHDCLLDGVAAHLYAEFDGQALNRQALTEAVRALYAKHPMLRLAI
TKDGQQKILPLSTFHQLKVDDLSQWKPDEVESFVHTKRQRMTHQMLDLTQGNPIEISLTL
LPEGKHRLHIDADMIACDAQSFRLLVDDLTSLYLEAIEHRLEIIESDVVTFFQYLDAQQA
DRALAKRKEVDKKWWQERLATIPAEPSLPYQPVPTDAVSANSQRFAHWFTPVERKGLAEV
ARQHHLTLTQLTLALFSQVIANACQERQFRLNVPTFHRGNRSLDIEHTIGDFSNLLIFSA
DVGTTQTLLSLCQQTANQLHQLLRHESYSGVSVMRDLSRKQGGVQRSPIVFTSGMEMRDE
EIFSDHVTQHLGRMNWVISQGAQVTLDAQIAPAYEGILLNWDVRMENFADKDITALFAHY
VDLIRCVALHPEMMQQSVQQIDAQLGYARRESIQEMPLTPLQQAYLLGRSTQIALGGVAM
HEFREYRGHIDTQSLHSRLLYLVEHIPALRTRIDQEKWIQWVSPCIALNWQAIDLQHLSR
EQALLAVEPVRQQYQQRMHDLTRSPWQICVVQLPIEEQEEFSSIVLTSFDALIVDGRTHA
LILAALLGSEEPDITQVVQNARDTQSISPQFASKKAQDEAYWKSKLHPDCPPPALPWKQA
LETITTSRYARESLQIPKESVGKLNRCGIENGLFLNSLLTATILDVLSYWTTEIGMRVGF
PVLIPSSNAIDGNESSFVILEHEKSTLSLLSQASKLQREMLEALEHLAFSGVDLNRLLMN
QAPQALVLPVVLTNGLSWKTLNPEDAVTLFDGVTQTPQVALDIRLTYDEQKNLIISFDYA
LAVLETELIREMLSALHHRLSQITSSASLAAPLEPCIDLSHYRFNSDESASHDCDFLAKL
AQQLFVRTEDKTAVICGEQTLSYAQLGEQVQRVMWQLKARGLTTGNVLAICLPRSVEHIV
ISLASALSGIIWVPIDAASPKERLNYLLENCHADLVVMDKPCEFGNVIAFDALIEPVLFA
DGVPDVTPLDQLSRLSQSQQTAYYLYTSGTTGKPKCVVVNNQATSNVIGQTGQAWHLTSE
DVVMSVTPLHHDMSVFDLFATLSFGATLVLPAGHEEKDALQWNRLIERHQVTIWVSVPAI
LEMLLSCTQAGQLHSLRLIAQGGDYIKPATIAQLRAGSNPPRLISLGGPTETTIWSIWHE
LTADDVSVIPYGRPLAGNRYFIMDEIQRHVPQGVVGRIFTSGVNLAQGYLEDGELKQTDF
VTVLDEHGHPVRAFRTGDQGYYRADGNIIFASRINGYVKVRGVRVSLPDIEKQLQTHPAL
ASVVVVDYADTNGDTALAALFSVKPQQSASSQALREFAKQSLPSSHIPSRFIALEALPLS
ANGKVDRKQCQAHVQRQSISVEPVGQPNQSQPLSPPTLSSASLSEFEQRVWRQHQRHGDG
RNQYATAYRLSGKVNIARLITALSQLPNHFPVLNRRYVLDEASGLTLYSAKPTPLEIHFE
HVESMDEAFEHLVRWQNQPMDLAKQATLSFCLLSLGSEERVLGVISHQIISEQWDWRRVF
ECVTNGYNQIACDIDPVMEGEDLSLGFTPVMPQTPLSQALLPWLQPASHATWIEQSLPSA
NSAINTLCSRKYRIALHSSVLAEHGLAQPDKQEVLALIAALFARYLAASAKLGQFELYVP
HDVERKTRELNGSMIESQLVHIALKGFERPLSQLSQEILDAMRQPLTGGVASETHASAAA
LVTWLVDPSVHLQLEGLRCEKLLFAAMHPKFEVALGVGLNCQGALVLELALDATVSPHVG
AYLLEQFVAAIGGRTMPSSTTSSSHVSAIELTSNNPPTSNNAHAALAESELELSAVNSSA
VEECILAEFRSALGVAEMTAEDDFFDFGGHSLIATRVIGRLLSEQGIELHINDMFSFPNA
KQLAQQAVLHRKPTSTSFAVSEVVESSKAPLSLAQASLWKAMSKYAKFGLTHIFNLPFAL
KFLDEVNEQAFGEAFHWLLLRHAGLRTHFGLEDGQPYQHVIAASNIEHYQWFWTSKDNAA
QSVARLLAQEAEHTFDLSQELPLRLNFVRDEQTGTQYLSLLFHHIVLDEWSINILMDELA
QVYQHSVQGTRPQWQTEPLPFHEFARKQRSSAFNQTHLNYWLTKFAGVPWAQPLFAADHP
LSNSTGVDLGEGGWVEIKLPKSTMVSLYQLAKARHASLFNVMYAAISASVHCLGAPEKLL
VGTPASGRLDAEFFDTVGYFTTMGVQLVDFTKVQTVWQLIEQVKNSINQSMPYTDIPIDL
IEEGLKGVEHETEGHMFEVFIQLHAKNKLHGELLLTEGHAIRFQQVDPDKSESGLGLQFE
ILEERIEQKQTLRVMMSYMSKHYSPAQVALLTKVTSGMFERFSDCIAQDIALPTLKKQVR
QLEDEACRSPSMG

NT seq 7242 nt +upstreamnt +downstreamnt
atgaaagaaatgacagcaatgcaagcggcttattggctagggcgtcaacacgactgcttg
ctcgatggtgtggccgcgcatctctacgccgaatttgatggtcaagcattaaatcgacag
gcgctaacggaagcggtacgtgcgctgtacgcgaaacatcccatgttacgtttagcgatc
accaaggatggacagcagaagatcttgccgctctcaactttccatcagcttaaagtggat
gacctatcacaatggaagccagatgaggtggagtcttttgtgcatactaagcgccagcga
atgacccaccagatgctcgatttaactcagggaaacccgattgagatcagcttgactctg
ttgcctgagggcaaacaccgattacacattgatgcggatatgattgcgtgtgatgcacaa
agttttcggctgttggtggacgatctcacctcactctatttagaggccatagagcatcga
ttagagatcattgagtctgatgtggtgacttttttccaatatcttgatgctcagcaagcc
gatcgtgctttggcaaaacgcaaagaggtggataagaaatggtggcaagagcgtcttgcg
acgattcccgccgagccaagtttgccttatcaacccgtaccaaccgacgccgttagcgca
aacagccaaaggtttgcacactggttcactccagtggagcgcaaagggttggcggaggtt
gcgcggcaacatcatctcacactgacccaactgacattggcactcttttcacaagtgatt
gccaatgcttgccaagagagacaatttcgactcaatgtacctacattccatcgcggcaat
cgctctttggatattgaacacacgatcggcgatttttccaatttgctgatttttagcgcc
gatgtgggaacgactcagaccctgttaagcctgtgtcagcaaacggctaaccaactgcat
caattacttcgccatgaaagctattcaggggttagcgtgatgcgcgatttatcgcggaaa
cagggtggggtgcagcgttcaccgatagtctttacctcaggcatggaaatgcgagacgag
gagatcttttccgatcatgtcactcagcatttagggcgtatgaattgggtgatttcgcag
ggagcgcaggtgactctcgatgcgcaaattgctccggcttatgaagggattttgctcaat
tgggatgtgcgaatggaaaacttcgctgataaggacatcacagcgcttttcgcgcattac
gttgatttgatccgctgtgtggcgctgcatcctgagatgatgcagcaaagcgtacaacag
attgacgcgcaactcggttatgctcgccgcgagtcgattcaggagatgccactgacccct
ttacaacaagcttacttgctaggtcgctcaacccaaattgccttaggcggcgtcgcgatg
catgagtttcgtgagtatcgaggtcacatcgacactcagtcactgcatagccgtctgctc
tatctcgttgagcatattcctgccttgagaactcgcattgatcaagagaaatggattcag
tgggtctctccttgcatagcgttaaattggcaagccatcgatttacagcatctttcccgc
gaacaagccttattagcggttgagccagtcaggcagcaatatcagcagcggatgcatgat
ttaacgcgctcgccctggcaaatctgtgtggtgcaactgccaatagaagagcaagaggag
ttcagctccatcgtattgaccagctttgatgctttgattgtcgatggtcgcacccatgca
ctcattcttgctgcactactaggaagcgaagaacccgatataactcaggtggtgcaaaat
gctcgtgatactcagtccatctcgccgcaattcgcctccaaaaaagcgcaagatgaagcg
tattggaaaagcaaacttcatcctgattgcccgccgccagcactgccttggaaacaagca
ttagagacgatcactacgtctcgttatgctcgtgaaagtttgcaaatacccaaagagagt
gtcggtaagctcaatcgatgcggcattgaaaatggcttatttctcaattccttgctgaca
gcaaccatcttggacgtgctctcctattggacaaccgaaatcgggatgcgagtgggtttt
ccggtattaattccaagcagtaatgcgattgatggcaatgagtcatcctttgtgatctta
gagcatgaaaaatccaccctgagtttgctgagccaagcgagcaagctacagcgtgagatg
ctagaggctcttgagcatcttgctttttctggcgtcgatcttaaccgtctgttgatgaat
caagcgccgcaagctctggtgctgccggttgtgttaaccaatggtttgtcttggaaaacc
ctgaatccagaggacgctgtcactctgttcgatggggtaacgcaaactccgcaggtggct
ttagatattcgcttaacttacgacgagcagaaaaacctcatcatcagctttgattatgct
ttagcggttttagagactgagcttatccgcgagatgttaagtgccttacatcatcgcttg
agtcagatcacttcgtcagcatcattggccgcgccgcttgagccatgtatcgacctttca
cactaccgttttaatagcgatgagtcggccagtcacgattgcgattttcttgccaagtta
gcgcagcaattgtttgtccgcacagaggataaaaccgctgtgatctgcggtgaacaaacc
ctttcttatgctcaattgggtgagcaggttcagcgcgtgatgtggcagctcaaagcgcga
gggttgaccacaggaaatgtgctcgccatttgcttgccacgcagtgttgaacatatcgtc
atcagtttggcttctgcactttcggggattatctgggtacctattgatgctgcgtctccc
aaagagcgtctgaattaccttttagaaaattgtcacgccgatctggtggtgatggataag
ccctgtgagtttggcaatgtgatcgcttttgatgccttgattgagcctgtcttattcgcc
gatggagtacctgacgttacaccactcgatcaattaagccgattaagccaaagccaacaa
acggcttattatctttatacctctggcactacgggcaaacctaagtgcgtggtggtcaat
aatcaggcgacctcgaatgtgattggtcaaactggccaagcgtggcatctcaccagtgag
gatgtggtgatgtcagtgacgccattgcatcatgatatgtcggtgtttgatctctttgcc
accttgagcttcggagcgacgttagttcttcccgctgggcatgaagaaaaagatgcgttg
caatggaatcgcttaattgagcggcatcaagtgacgatttgggtctccgtccccgctatc
ttggagatgttgctctcttgcactcaagcagggcaattacactcacttcgtctgattgcc
caagggggggattacatcaaacctgccaccatcgcccaattacgcgctggttcaaatccg
ccgcggttgatctctttgggcggtcctaccgagacgacgatttggagcatctggcatgag
ctgacggcagatgatgtcagcgtgatcccatatggtcggccgttggcgggaaaccgttat
ttcattatggatgagatacaacgccatgtaccgcaaggtgtggtcggccgtatcttcacc
tctggggtcaatttagcgcaaggttatcttgaagacggcgaactgaaacaaaccgatttt
gtcaccgtattggatgagcatggccaccctgtgcgcgcgtttcgaacgggcgatcaaggc
tactaccgcgcggacggcaatatcatttttgctagccgcatcaatggttatgtgaaagtt
cgtggggtacgagtgtcactgccggatatcgaaaagcagctgcaaactcatccggcgctc
gcgagcgtggtggtggtcgattatgcggatactaatggagataccgctttagccgcatta
tttagcgttaaacctcagcaatcagcatcgagtcaggcgttacgagagtttgccaaacaa
tcgctaccgtcttcgcatattccgagtcggtttattgctttagaggctttaccgctttct
gcgaatggtaaagtggatcgcaaacagtgccaagcgcatgttcagcgacaatcgatctct
gttgaaccagtaggtcaaccgaatcaaagtcaacctctctcaccacctaccttgtcatcg
gcttccttgagtgagtttgaacagcgagtctggcgacagcatcaacgacatggtgacgga
cgcaatcaatatgcgaccgcttatcgattgagcggaaaagtgaatatcgcgcgcttaatc
acagcgctcagtcagttgcccaatcattttccagtgttaaaccgacgctatgtgcttgat
gaggcatccggcttaaccttgtactcggcgaagccaacaccgcttgagatccattttgag
catgttgagtcaatggatgaggcgtttgaacatcttgtgcgatggcaaaatcagccgatg
gatttagccaagcaagccacactaagtttttgcttgttgagtttggggagcgaagagcga
gtgcttggggtgataagccatcaaattatcagcgagcaatgggattggcggcgcgtattt
gagtgcgtaaccaatgggtataaccaaatcgcctgtgacatcgatcctgtgatggagggg
gaggatctttccctcggctttacccctgtgatgccgcaaacgccattatcccaagcgttg
ttgccgtggttacagcctgcgagccacgctacatggattgagcagagcttgccgagcgca
aatagcgccatcaatacgctttgcagtcgtaaatatcggattgccctacacagcagcgta
ctggcggagcatggtttagcgcagccggataagcaggaagtgcttgcactgatcgccgcg
ttatttgctcgctaccttgccgcaagtgcgaaacttggccaatttgagctttacgttccg
catgatgtggagcgcaaaacgcgtgagttgaatggttctatgattgaaagccagttggtg
catatcgcccttaaaggctttgagcgtccgctttcgcaactgagccaagagatcttagac
gctatgcgccagccgttaacggggggagtcgctagcgaaactcacgcctctgccgcagcc
ttggtgacttggttagtggatccttcagtgcatctacaattggagggcttgcgctgcgaa
aaattactttttgcagccatgcaccccaaatttgaagtcgccttgggggttgggcttaat
tgccaaggtgccctagtacttgagctggcgttagatgccacggtttccccccatgtcgga
gcctacttgcttgagcaatttgtcgctgcgataggtgggcgaacaatgccttcttcgaca
acctcatcctctcatgtctcagccattgagttgacgtcaaacaatccgccgacctcaaac
aatgcgcatgcggcgttggcagagtctgagcttgaattgagcgctgtaaattcctctgcg
gttgaagagtgcattttggctgagtttcgctcagcacttggtgttgccgagatgacggca
gaggatgatttctttgattttggcggacattccctgatcgcaacgcgagtcattggtcgc
ttgttgagcgagcaaggtattgaactgcacatcaatgatatgtttagtttccctaatgcc
aagcaactggcgcagcaagccgtacttcaccgtaaacccaccagcacatcattcgcagtg
agtgaggtggtcgagtcgtccaaagcgcctttgtcgttagcacaagcctctttatggaag
gcgatgagcaaatacgccaagtttggtttgacccacatcttcaatcttccgtttgcgctt
aaatttttagatgaggtcaatgagcaagcatttggtgaggcttttcactggcttttactg
cgtcatgctgggttacgaacccactttggcctagaagatgggcagccttaccagcacgtg
atcgcagccagcaacatagaacattaccagtggttctggacgtctaaagataacgccgcc
caatccgtggccagactactggcgcaagaggccgagcacacctttgacctgagccaagaa
ttgccacttcgactcaatttcgtacgtgatgaacagacggggacgcaatatctttcactt
ctgttccaccatattgtgttggatgagtggtcgatcaatattttgatggatgaattagca
caggtgtatcaacacagtgtgcaaggtactcgtccacagtggcaaacggaacccttacct
ttccatgagtttgctcgcaagcagcgttcttcggcattcaatcaaacgcatcttaactat
tggttaaccaagtttgccggtgtgccttgggcacagcctctgtttgctgcggatcatcct
ttaagtaacagcactggcgtcgatcttggagaaggcggctgggtcgaaataaaattgccg
aaatcaaccatggtatcgctgtatcaattggctaaagcacgccatgcttcgttgtttaac
gtgatgtatgcggcgatttctgcgtcggtacattgtctcggcgcaccagaaaagctgctg
gttggcacacctgcttccggtcggctggatgccgagtttttcgacacagtcggttatttc
actaccatgggcgttcagttggtggatttcacgaaagtacaaacggtgtggcaactcatc
gagcaagtgaaaaacagcattaaccagtcgatgccatacacagatattccgattgacctg
attgaagaagggctcaaaggtgttgagcatgagacggaaggtcacatgtttgaggtcttt
atacaactgcatgcaaaaaataagctgcatggagagctactgttgacagaagggcatgcg
atccgcttccaacaagtcgatcccgataaaagtgaatccggcttaggtttacagtttgaa
attttagaagagaggatcgagcaaaagcagacgttgagagtcatgatgagttatatgtcg
aaacactatagcccagctcaagtcgctctgttgaccaaggtaaccagtggcatgtttgag
cggttttccgattgtattgcacaagatattgcactgccgacgctgaaaaagcaggtgagg
cagcttgaagatgaagcttgtcgctctccgtccatggggtag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (4)   
   PROSITE (3)   
All databases (14)

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