KEGG V.cholerae: VC0020

Vibrio cholerae O1: VC0020

Entry

VC0020 CDS V.cholerae

Gene name glyS

Definition glycyl-tRNA synthetase subunit beta (EC:6.1.1.14)

Orthology K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14]

Pathway vch00970 Aminoacyl-tRNA biosynthesis

Class Genetic Information Processing; Translation; Aminoacyl-tRNA
biosynthesis [PATH:vch00970]

SSDB

Motif Pfam: tRNA_synt_2f DALR_1
PROSITE: AA_TRNA_LIGASE_II_GLYAB

Other DBs NCBI-GI: 15640052
NCBI-GeneID: 2614960
JCVI-CMR: VC_0020
UniProt: Q9KVW8

Position I:complement(16869..18935)

AA seq 688 aa
MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANL
AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTDKGEWLLFKEQ
VQGQQTASVVVEMAAKALANLPIAKPMRWGDKETQFIRPVKTLTILFGSELIQGEILGVA
SARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEGSQQAAQQLGGIA
DLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFPVYDASKKLLPNF
IFVSNIESKEPRHIVEGNEKVVRPRLADAEFFFNTDRKRPLVDRLPLLENAIFQQQLGTI
KDKTDRITELAGYIAEQIGADVEKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDG
EAEEVAVALNEQYMPRFAGDELPSRGVSAAVAMADKLDTIVGIFGIGQAPKGSDPFALRR
ASLGVLRILVEYGYQLDLVDLIAKAKSLFGDRLTNANVEQEVIEFMLGRFPTWYQDAGFS
IDIIQAVLARNPTKPADFDQRVKAVSHFRALEEAEALAAANKRVGNILAKYDGELGEEID
LALLQEDAEKALAEAVEIMAEALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDE
ALKKNRLTLLNKLRNLFLQIADISLLQK

NT seq 2067 nt +upstreamnt +downstreamnt
atggcaaaagaatttttaattgagctaggcacagaagagctgccaccaaagcaactgcgc
acactggctgaagcctttgcggcgaattttgcggcagaactggcaacagctgacatcgcc
catgaaggcgtaacttggtttgccacgccacgccgtttggcactgaaagtggccaatttg
gcagaaagccaaccggatcgcgtcgttgaaaaacgtggtcctgccgtcaacgttgcgttt
gatgccgatggcaagccaaccaaagccgctgaaggctgggcgcgtggcaatggcatcacg
gtagagcaagcagaacgtctcgtcacagacaaaggcgaatggctgctcttcaaagaacaa
gtgcaaggccaacaaaccgcttctgtggttgtggagatggcggccaaagcgctggctaac
ctgccgattgcgaaaccgatgcgttggggcgacaaagaaacccaatttatccgtccagta
aaaactctgaccattctgtttggtagcgaactgatccaaggcgaaatcttgggtgttgct
tctgcacgcaccctccgtggtcaccgctttatgggtgaagcggaattcaccatcgaatcg
gctgagcagtaccctgcgatccttgaagagcgcggcaaagtcatcgctgactacgcgact
cgtaaagcgatgatcatcgaaggctcacaacaagcggctcagcagctcggcggtatcgcg
gatctggaagatgcgctggtagaagaagtgacctcgctggtggaatggccagtggtgatg
acggcgaaatttgaagaaaaattcctcaaagttccagcagaagctttggtgtacaccatg
aaaggtgaccaaaaatatttcccagtctatgacgcaagcaaaaaactgctgcctaacttc
atcttcgtttcgaacatcgaatcgaaagagcctcgccacattgtggaaggtaacgagaag
gtagttcgtccacgtctggcagatgcagagttcttctttaatactgaccgcaagcgccca
ttggtggatcgcttacctctgctcgaaaacgcgattttccaacagcaactcggcacgatt
aaagacaaaaccgaccgcattactgaactggctggctacatcgcagagcagatcggtgct
gacgtggagaaatctaagcgtgcaggcctactggcaaaatgtgacctaatgacctcgatg
gtgtttgaatttaccgacacccaaggcgtgatgggtatgcattatgcgcgtcacgatggc
gaagcagaagaagttgcagttgcgctgaatgagcagtacatgccacgtttcgcgggtgat
gaactgccaagccgtggtgtttcagctgcggtcgcgatggctgacaaactcgatactatc
gtcggtatatttggtattggtcaggcgccgaaaggcagtgacccatttgcgctgcgtcgt
gcttcactgggtgtactgcgtattctggttgagtacggctaccagttggatctggtggat
ttgatcgccaaagccaaatcactgtttggtgaccgcctgactaacgccaacgttgagcag
gaagtgatcgagtttatgcttggccgtttcccaacctggtaccaagatgccggttttagc
atcgacatcatccaagcggtactggcgcgtaacccaaccaaaccagccgactttgatcag
cgtgtgaaagccgtatcgcacttccgcgctcttgaagaagccgaagcactggctgctgcc
aacaagcgtgtaggcaacattctggctaagtacgatggtgaattgggtgaagaaatcgat
ctcgctctgctgcaagaagatgcggaaaaagccttagccgaagccgtcgaaatcatggca
gaagcgttagaacctgcgtttgcaaccggcaactaccaagaagctctgagcaaactggct
ggcctgcgcgcgcctgtcgatgccttcttcgacaacgtgatggtgatggctgacgatgaa
gcactgaagaagaaccgtctcacgctactcaacaagctgcgtaacctgttcctgcaaatt
gccgacatttcgctgctgcaaaaataa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JCVI-CMR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (2)   
   PROSITE (1)   
All databases (15)

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