KEGG V.cholerae: VC0120

Vibrio cholerae O1: VC0120

Entry

VC0120 CDS V.cholerae

Gene name hemC

Definition porphobilinogen deaminase (EC:2.5.1.61)

Orthology K01749 hydroxymethylbilane synthase [EC:2.5.1.61]

Pathway vch00860 Porphyrin and chlorophyll metabolism
vch01100 Metabolic pathways

Class Metabolism; Metabolism of Cofactors and Vitamins; Porphyrin and
chlorophyll metabolism [PATH:vch00860]

SSDB

Motif Pfam: Porphobil_deam Porphobil_deamC DUF3186
PROSITE: PORPHOBILINOGEN_DEAM

Other DBs NCBI-GI: 15640152
NCBI-GeneID: 2614463
JCVI-CMR: VC_0120
UniProt: Q9KVM1

Position I:complement(114761..115714)

AA seq 317 aa
MDRNIIMTETPIRIATRQSPLALWQANYVKDALMAAHPGLQVELVTMVTRGDVILDTPLA
KVGGKGLFVKELEIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYA
KIEDLPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGL
KRLELESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAM
NLTLQGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQL
LSQGAKEILERLYCDHE

NT seq 954 nt +upstreamnt +downstreamnt
atggataggaacatcataatgaccgagacgccgattcgcattgcaacccgccagagtcca
ctggctttgtggcaagccaactatgttaaagacgccttaatggcagcccaccccggactg
caggtggagttggtgactatggtcacgcgcggcgatgtgattctggatactccactggct
aaagtgggcggtaaaggcttattcgtgaaagagctggaaattgccatgctcgaagggcgc
gccgatttagccgtgcattcaatgaaagatgttccggtcgatttccctgacggtctgggc
ttagtcaccatctgcgaacgggaagatccgcgtgatgcgtttgtctcaaatacctacgcc
aagattgaagatctgccctcgggcgctatcgtcggtacctgcagtttacgccgtcaatgc
caactcaaagcggcacggccagatttagtgattaaagagctgcgcggcaacgtggggact
cgcctaagtaagcttgatgcgggcgaatacgatgccatcattttagcggcagcaggccta
aaacgccttgagctcgaaagccgtattcgtagctttattgaaccggaacagtccctacct
gcagttggccaaggtgccgttggtattgaatgtcgcgtgaatgatcaacgcgtgcgcgcc
ctactcgcacctcttaaccatgctgataccgccgatcgagtgcgctgcgaacgcgcgatg
aatctcacgttacaaggtggctgtcaggtgccgattggtagctatgcactgctggagggt
gacactatttggctacgcgctcttgtgggtgaacccgatggttcgcaaatcgtgcgcggc
gaaattcgcggacctcgcacacaagctgagcaacttggcatcacgctggctgagcaactg
cttagccaaggagccaaagagatcttggagcgtctctactgtgaccacgaataa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JCVI-CMR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (3)   
   PROSITE (1)   
All databases (17)

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