KEGG V.cholerae: VC0125

Vibrio cholerae O1: VC0125

Entry

VC0125 CDS V.cholerae

Definition diaminopimelate decarboxylase

Orthology K01586 diaminopimelate decarboxylase [EC:4.1.1.20]

Pathway vch00300 Lysine biosynthesis
vch01100 Metabolic pathways

Class Metabolism; Amino Acid Metabolism; Lysine biosynthesis
[PATH:vch00300]

SSDB

Motif Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
PROSITE: ODR_DC_2_2 ODR_DC_2_1

Other DBs NCBI-GI: 15640156
NCBI-GeneID: 2615366
JCVI-CMR: VC_0125
UniProt: Q9KVL7

Position I:119229..120482

AA seq 417 aa
MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV
KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI
KCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA
QVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG
LGVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHK
NFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEAQTYDLVGPVCETSDFLGKDRDLVLQE
GDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESVLPE

NT seq 1254 nt +upstreamnt +downstreamnt
ttggattacttcaattatcaggaagatggtcagttgtgggctgagcaagttccactcgcc
gatttggcaaaccagtacggtacaccgctttatgtttactcaagagcgacacttgagcgc
cattggcacgcgtttgataaatcagtcggtgattatcctcacctaatttgttatgcggtg
aaagccaactctaacttaggggtattgaatactttagctcgtttgggttcaggttttgat
atcgtctccgttggcgaattagagcgtgtattggccgccggtggtgacccaagcaaggtg
gtattctctggtgtgggtaaaaccgaagctgagatgaagcgcgccctgcaattgaagatc
aaatgctttaacgtggaatcggagcctgagctgcagcgcctgaataaagtggctggcgag
cttggtgttaaagcgccgatttcactgcgcatcaatcctgatgtggatgccaaaactcac
ccttacatttcaacgggtctacgtgataacaaatttggtatcacctttgaccgcgcagcg
caggtatatcgcttagcgcacagcttacccaacctcgatgtacatggtattgactgccat
atcggctcacagctaaccgctctcgcaccgtttattgatgcgactgaccgtttactggca
ctgattgattcgctgaaagcggaaggcattcatatccgccacttggatgtcggcggtggt
ttaggggtggtttatcgtgatgaactgcctccgcagccttcggaatacgccaaagcattg
ctggaccgcctagagcgccaccgcgatttagagctgatttttgaaccgggacgcgcgatt
gcggctaacgcgggagtattggtgactaaggtggagtttctcaaacacactgagcacaaa
aacttcgcgatcattgatgcggcgatgaacgatttgatccgcccggcgctataccaagcg
tggcaagacatcattccactgcgtccgcgccaaggcgaagcccaaacttatgatttggtt
ggcccggtgtgtgaaaccagtgatttcctagggaaagatcgcgacttagtgttgcaagag
ggggatttactggcggtgcgctcttctggtgcgtatgggtttaccatgtcgtcgaattac
aatacccgtccgcgagtggctgaagtcatggttgatggcaataaaacctatttggtgcgt
cagcgtgaagagcttagcagcttgtgggcgttagaatcggtattaccggagtaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JCVI-CMR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (3)   
   PROSITE (2)   
All databases (18)

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