KEGG V.cholerae: VC0126

Vibrio cholerae O1: VC0126

Entry

VC0126 CDS V.cholerae

Gene name dapF

Definition diaminopimelate epimerase (EC:5.1.1.7)

Orthology K01778 diaminopimelate epimerase [EC:5.1.1.7]

Pathway vch00300 Lysine biosynthesis
vch01100 Metabolic pathways

Class Metabolism; Amino Acid Metabolism; Lysine biosynthesis
[PATH:vch00300]

SSDB

Motif Pfam: DAP_epimerase PhzC-PhzF RGM_N Laminin_G_1
PROSITE: DAP_EPIMERASE

Other DBs NCBI-GI: 161582035
NCBI-GeneID: 2614550
JCVI-CMR: VC_0126
UniProt: Q9KVL6

Position I:120494..121324

AA seq 276 aa
MHFHFSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDF
HYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNM
GVPEFEPNKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIRTAAVETLGPL
LESHERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDEQV
RVHLPGGELEIHWQGPGKPLYMTGPATHIYDGQISC

NT seq 831 nt +upstreamnt +downstreamnt
atgcatttccatttttctaaaatgcacggtttgggcaacgactttatggtcgtggactgt
attacccaaaacgtcttcttctctccggaattgatccgccgtctggcggatcgccatacg
ggagtcggctttgatcaattgttggtggttgaagcgccttacgatccagaatcggatttc
cattaccgcattttcaatgccgatggcagcgaagtggagcagtgtggcaatggcgcgcgc
tgttttgcccgttttgtacgcatgaaagggttaaccaacaagtacaccatccatgtcagt
accaagaaaggcaaaatggtactcaatgtggaagaggaagatctgatcaccgtgaacatg
ggtgtgccggagtttgagccgaacaagatcccatttcgcgccaaacagagcgaaaaaacc
tacattctgcgtgtcggtgaacacaccttgttttgcggcgcggtgagtatgggcaacccg
catgtagtgactgtggtggacgatatccgcactgctgcggtagaaaccttagggccgctt
ttggaatcgcacgagcgtttccctgagcgcgtcaacgccggttttatgcaggtcgtgagc
cgtgatgagatcaatttgcgcgtgtatgaacgtggtgcgggcgaaactcaagcttgtggc
agtggcgcgtgcgccgcggttgcggtaggcattttgcaaggtttactggatgagcaagtt
cgtgtccatcttcccggtggtgagctggaaatccactggcaaggccccggcaaaccgctg
tatatgacaggcccggctactcatatctacgatggccaaatctcttgctaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JCVI-CMR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (4)   
   PROSITE (1)   
All databases (18)

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