KEGG T00034: VC0613

Vibrio cholerae O1 biovar El Tor N16961: VC0613

Entry

VC0613 CDS T00034

Definition

beta-N-acetylhexosaminidase

Orthology

K12373

hexosaminidase [EC:3.2.1.52]

Organism

vch Vibrio cholerae O1 biovar El Tor N16961

Pathway

vch00511	Other glycan degradation
vch00520	Amino sugar and nucleotide sugar metabolism
vch01100	Metabolic pathways
vch01110	Biosynthesis of secondary metabolites

Class

Metabolism; Carbohydrate metabolism; Amino sugar and nucleotide sugar metabolism [PATH:vch00520]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:vch00511]

SSDB

Motif

Pfam:

Glyco_hydro_20 Glyco_hydro_20b Glycohydro_20b2

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

I:complement(646873..648786)

AA seq 637 aa
MSYRIEFAVLSEQKPDCRFGLTLHNLSDQDLHDWSLYFVIDRYIQPMSVTNGQLTQVGSL
CSIVPTEKVLQANGHFYCEFIIKTAPYHFYTDGVKHAFVQLNDKQPVERINVAVNPIVLA
SPFRERSQIPEVTAAELCLIPKPNSLQRFQGEFVVNHSSQISLQSDSAARAARWLEQELH
ALHEFKLNTVGHSDIVYRSNPTLDEGHYQLNIEAQGIKIEAGSHSGFMHASATLLQLAQA
HQGSLRFPLVNIVDAPRFKYRGMMLDCARHFHSLEQVKRVINQLAHYKFNVFHWHLTDDE
GWRIEIKRLPQLTDIGAWRGMDEVLEPQYSLLTERHGGFYTQDEIRAVIEYASDRGITVI
PEIDVPGHSRAAIKALPAWLVDEEDCSQYRSIQYYNDNVLSPALPGTYQFLDIVLEEVAA
LFPSQFIHIGADEVPHGVWVDSPKCQALMQEQGYTDPKELQGHLLRYAEKKLKSLGKRMV
GWEEAHHGDKVSKDTVIYSWLSEKAALDCAKQGFDVILQPGQFTYLDIVQDYAPEEPGVD
WAGVTPLERAYGYEPLADVPANDPLRKRILGIQCALWCELINNSERMEYMLYPRLTALAE
GGWTEKSQRDWLDYLARLKGHLPLLDKQKIPYRAPWK

NT seq 1914 nt +upstreamnt +downstreamnt
atgagttatcgaattgaatttgcggtgctctcggaacaaaaaccggattgccgttttggt
ttaaccctgcacaatttgagcgatcaagatctgcatgattggtcgctgtattttgtgatt
gatcgttacatccaacccatgagtgtgaccaacggtcaactgacccaagtcggcagctta
tgttcgattgttccaacggaaaaagtgttgcaagctaatggccacttttattgtgagttc
atcatcaaaaccgcgccttaccatttctacaccgatggggtaaagcacgcgtttgtccaa
cttaatgataaacagcctgttgaacgtattaacgtcgcggttaaccctatcgttctcgcg
tcaccatttcgcgagcgtagccagatccctgaagtgactgcggctgagctctgtctcatc
cccaaacctaactcactgcaacgtttccaaggtgagtttgtggtcaaccactccagccag
atctcgctgcaatcggactcggccgcgcgtgctgcacgctggttagagcaagaattgcat
gcactgcatgagttcaaactgaatacggttggccatagcgatatcgtctaccgcagtaat
cccacgctcgatgagggccattaccaactcaatatcgaagcgcaagggatcaagattgaa
gcaggcagccacagtggctttatgcatgccagcgcgactttgctgcaactggcgcaagcg
catcaaggctcattgcgctttcctctggtcaacattgtcgatgcaccgcgctttaagtat
cgcggtatgatgctcgattgcgcccgccattttcactcgcttgagcaggtcaaacgagtg
atcaatcaactggcacactacaaatttaacgtgttccactggcatctgactgatgatgaa
ggttggcgtattgagattaaacgcctgccgcaactgacagacattggtgcatggcgtggc
atggatgaagtgctggaacctcagtacagcttactcacggagcgtcatggcggtttctat
acccaagatgagatccgtgcagtgattgagtacgccagcgatcgtggcattactgtcatc
cctgaaattgacgtaccagggcacagccgcgccgcgattaaagcgctgccggcatggctg
gtcgatgaggaagattgctcgcaatatcgcagtattcagtactacaacgacaacgtgctc
tcccctgcactgccgggcacttatcaattcctcgacatcgtattggaagaagtggctgcg
ctgtttccaagccaatttattcatatcggtgccgatgaagtcccacacggtgtgtgggta
gatagcccgaaatgccaagccttaatgcaagagcaaggctataccgacccgaaagagctg
caaggccacttactgcgctacgccgagaaaaaactcaagagcttgggtaagcgtatggtc
ggctgggaagaagctcatcacggcgacaaagtgagtaaagatacggtgatttactcttgg
ctatcggaaaaagccgccttggattgcgccaaacaaggctttgacgtgattttgcagccg
ggacaatttacctatctcgatatcgttcaagactacgctcctgaagaaccgggcgtggat
tgggcgggtgttactccgctagagcgtgcttacggttatgaaccgttagccgacgttccg
gccaatgacccactgcgtaaacgcattttaggtattcaatgcgccttgtggtgtgaattg
atcaataactcagaacgcatggaatacatgctctatccacgtctcacggcattagcagaa
ggcggttggacagagaaatcccagcgtgactggttggattatctagcgcgtttgaaaggc
catttaccactgctggataagcagaaaataccttatcgcgcgccttggaagtaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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