KEGG T00034: VC2087

Vibrio cholerae O1 biovar El Tor N16961: VC2087

Entry

VC2087 CDS T00034

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

vch Vibrio cholerae O1 biovar El Tor N16961

Pathway

vch00020	Citrate cycle (TCA cycle)
vch00310	Lysine degradation
vch00380	Tryptophan metabolism
vch01100	Metabolic pathways
vch01110	Biosynthesis of secondary metabolites
vch01120	Microbial metabolism in diverse environments

Module

vch_M00009	Citrate cycle (TCA cycle, Krebs cycle)
vch_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:vch00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:vch00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:vch00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

I:complement(2246650..2249460)

AA seq 936 aa
MHNGVMKAWLESSHLAGANATYVEDLYELYLSDPDLVSEEWKRVFDGLPAHPTNVVEQPH
SRVRDYFRRLAQETKHYNVQVSDPEVDAKQVKVLQLINAYRFRGHEAAKLDPLGLWNRPE
VAELNPSFHNLTQEDMEETFNVGSFAIGKDTMKLKDIYQSLQKIYCGSVGAEYMHITDTE
QKRWIQQRLEPVVGTPVFSKEEKRTFLEELTAAEGLERYLGAKFPGAKRFSLEGGDALVP
MTKEMIRHAGASGMREVVIGMAHRGRLNMLVNVLGKKPQDLFDEFAGKHGEGWGTGDVKY
HQGFSADFATPGGDVHLALAFNPSHLEIVNPVVMGSVRARQDRLGDEDGSKVLPITIHGD
SAIAGQGVVAETFNMSQARGFCVGGTVRIVVNNQVGFTTSNPRDTRSTMYCTDIAKMVQA
PIFHVNSDDPEAVAFVTRLALDYRNEFKRDVVIDLVCYRRHGHNEADEPNATQPLMYQKI
KKHPTPRKLYADVLTERGECDLETATQLVNEYRDALDHGEVVVKEWRPMAMHSVDWSPYL
GHDWHIPWNSEYAMERLQDLGRRVCQYPESHVLHSRVEKIYQDRLSMISGEKMLDWGMAE
TLAYATLLDDGKRIRISGQDSGRGTFFHRHAVLHNQNDASTYIPLSQIHAGQGPFEVFDS
VLSEEAVLAFEYGYATAEPSGLTLWEAQFGDFANGAQVVIDQFISSGEQKWGRLCGLTML
LPHGYEGQGPEHSSARLERYLQLCAEQNMQVVVPSTPAQVYHMIRRQVVRPMRRPLVVMS
PKSLLRHPLCVSSMEDLAHGTFQPAIGEIDALNPSQVKRVVFCSGKVYYDLLEQRRANEQ
QDVAIVRIEQLYPFPLEEVQAAIANYTNVVDYVWCQEEPQNQGAWYSSQHNFRAAIPAGA
DLKYAGRPASASPAVGYMSVHMKQQKALIEDALTLA

NT seq 2811 nt +upstreamnt +downstreamnt
atgcacaacggcgtgatgaaggcatggctcgagtcttcacacttggctggcgccaatgca
acttacgtagaagatctctacgaactgtatctaagtgatcccgatctggtaagtgaggag
tggaaacgtgtttttgatgggttgcctgcgcacccaacgaatgtggttgaacaaccgcac
tcacgcgtccgtgactacttccgacgactcgctcaagagactaagcattacaatgtccaa
gttagtgatcctgaagtcgatgcaaaacaagtaaaagtactgcagctaattaacgcatac
cgtttccgcggtcatgaagctgccaagcttgaccctctcggtttatggaaccgccctgaa
gtggcggaactgaatccctcattccataatttgacccaagaagatatggaagagaccttc
aacgtgggctcctttgcgattggcaaagacacgatgaagctgaaagatatctatcaatcc
ctacaaaaaatctactgtggctctgtcggtgcagaatacatgcacatcaccgacactgag
cagaagcgttggattcaacagcgtctcgaaccagttgtgggtacccctgtattcagtaaa
gaagaaaagcgtactttccttgaagagctgactgcagctgaaggtttagagcgctatctt
ggtgcgaaattccctggtgctaaacgtttctctctcgaagggggggatgccttagttccg
atgaccaaagagatgatccgtcacgcgggtgccagtggcatgcgtgaagtggtgattggg
atggcgcaccgcggtcgcttgaacatgctggtcaacgttctgggtaaaaaaccgcaagat
ctgtttgatgagtttgccggtaaacatggcgaaggctggggcacaggtgatgtgaaatat
caccaaggtttctccgctgactttgcgacaccgggcggtgatgttcacttagcactggct
ttcaacccatcgcatcttgagattgtgaaccctgttgtgatgggttcagtgcgcgcgcgt
caagaccgcctaggtgatgaagatggcagtaaagtgctacctatcactatccatggtgac
tctgcgattgcaggacaaggtgtggtggctgaaaccttcaacatgtctcaagcgcgtggt
ttctgcgtcggtggtacagtacgtatcgtggtcaataaccaagtgggcttcacgacatca
aacccacgcgatactcgctcaaccatgtactgtaccgatattgccaagatggtacaggca
ccgattttccacgtgaattcagacgatcctgaagctgtagcctttgtcactcgtctagcg
cttgattaccgtaatgaattcaaacgcgatgtggtgattgatctggtgtgttatcgccgt
catggtcataacgaagcggatgagccaaacgcaactcagccattgatgtaccaaaaaatc
aagaagcatccaacacctcgcaagctgtatgcagatgtgttaactgagcgtggtgagtgc
gatctcgaaaccgcgactcaactggtgaatgaatatcgcgatgccctagatcacggtgaa
gtggtggtcaaagaatggcgtccaatggcgatgcactctgtggactggtcaccgtattta
ggtcacgactggcatatcccttggaatagcgaatatgcgatggagcgattgcaagatctt
ggtcgtcgtgtttgccaatatccggaaagccatgtgttgcatagccgtgtagaaaaaatc
tatcaagatcgtctctctatgatctctggcgagaagatgctggattggggtatggctgaa
acgcttgcgtatgccacattgcttgatgacggtaagcgcatccgtatctcgggtcaggac
tctggtcgtggaaccttcttccaccgtcacgccgttctgcataaccaaaacgatgcgagt
acttatattccactctcacagatccatgctggccaaggcccgtttgaagtctttgactca
gtattgtcagaagaggcggtattggcattcgaatacggctatgcgacagcggagcctagc
ggtttgacgttgtgggaagcacagtttggtgattttgctaacggtgcgcaggtggttatt
gaccagtttatctcctctggtgaacagaagtggggtcgtctatgtggcctgactatgttg
ctgccacacggttatgaaggccaaggccctgagcactcctctgcacgtttagagcgttac
ttgcagctgtgtgctgagcaaaacatgcaggtggttgttccgtctacccctgctcaggtt
taccacatgattcgtcgtcaagtggttcgcccaatgcgccgccctctggtggtgatgtct
cctaaatcgctgctgcgtcatccactgtgtgtctccagtatggaagatcttgcccacggt
actttccagccggcgattggtgaaattgatgcgctgaatccgtcgcaagtaaaacgcgtt
gtgttctgttctggtaaggtttattacgatctccttgaacagcgccgagccaatgaacag
caagacgtggcgattgttcgtatcgaacagttgtacccattccctctggaagaagtacaa
gcggccattgcaaattacaccaatgtggtggattacgtctggtgtcaggaagaaccgcaa
aaccaaggtgcttggtacagtagccaacataacttccgcgctgcgattccagcgggtgct
gatctgaaatacgcaggtcgtcccgcttcggcatctcctgcggtcggctatatgtcggtg
cacatgaaacaacaaaaagcgttgattgaagacgctctgaccctagcgtaa

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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