KEGG   Vibrio cholerae O1 MJ-1236: VCD_000124
Entry
VCD_000124        CDS       T00903                                 
Name
(GenBank) IcmF-related protein
  KO
K11891  type VI secretion system protein ImpL
Organism
vcj  Vibrio cholerae O1 MJ-1236
Pathway
vcj03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vcj00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VCD_000124
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vcj02044]
    VCD_000124
Secretion system [BR:vcj02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   VCD_000124
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: ACQ62092
Position
2:complement(137507..141052)
AA seq 1181 aa
MWKFIVGIVRRLKPTVVAALPILLFTTFILLNVAIWWAGPWLEVAGYKPLESIMARVVAS
SLFTLGCLAVWGIWQWRKLQAFKSEQKREEQLRQDPIKVYEQRQEVELNQVMLNMKQSLN
KHNYLYALPWYLVLGLENAGKTSLINRSGQNFVFSSVMRASGQKSENPYSFDWWIGDESV
LIDPDGELLTQGNRSEENDGALERRLWLHFVDWLDRTRSRRPLNGIVLALDVAHLATATA
SERKAYANLLRARLRELMETLSTRLPVYIALTKLDLLHGFEPFFKHYTKSQREEVLGFTF
SMDSVDNLDSWLEEFASEYTQFVSRVNGMLPHAVAAPMTLEERNAIYSFTRQISGLKEIL
QQFFQEALASDQFSTSALVRGAYFTSVYQQGVPTNAFDDAASRRYGLSHAINTAQRAKNS
TVYFTQKLFTHIIYPEAGLASDNFRVAKNKRRLMGLSFVACSVATLLLAGTWHRNYLNNV
QHADTVLTKVNQYKEQFPTSRSLASQREVLDPLNKIREATLEFGFFRDKPQYISDFGLYQ
GHTIGPKVEETYLNLLETRFLPLLMADTIVALNQAETDEEKLAVLRVYRMLVDKSGRYQD
YVMDYFAKYWQKSFSGQRQIQEELLGHLDYAMRHTDLTAERLNGDKGAEQVMRPYDKVIA
RAQVELGSMPNDQRVYRNLKLSAQTVLGPSVNLRSLIGPVFDVVFEERVLNSSSLFIPQM
LTKRGFDDYFMPQSESVSELALIDSWVLGQSKTAQFSEADKQALREKIRDLYVADYTNTW
RAALNEIDVKYFNDINDAVMVLENITSNLEPMQRLLRTLDDNTQLYSALPKDESALKELL
KSPKYKVASMIETPFADLNGMLKPVGSKPAYMTEVLASVDELKSYLKSIQDAPDVGMAAL
DATKARVKLVNADPIYTLKRISSGLPKPLDSMMAKLADESWYVVKQEAIKHLEVRWTEDV
YKTFQSKLAGRYPFNPASNKDVALADFEAFFAPNGTLDNFYNQQLKMFIDENISVASDDS
AQSIIRKEVLDQIKQAQKIREAFFNRKGILDVSFSVEPLSLSNNKRRSVLNVDGQFLAYS
HGPRENVELIWPNTLRDSAVSKVTLIPTQTNMSPRSLQIQGPWAFFRLLDQGDVVSASQT
SVDFKFIVDGGEMIYRINAEADANPFTERLFKSFKLSKTLY
NT seq 3546 nt   +upstreamnt  +downstreamnt
atgtggaaattcattgttggaatagtaaggcggcttaaacccacggtggtggcagcactt
cccattttgctattcactacgttcattttgctgaacgttgccatttggtgggcaggccct
tggttagaagtggctggctataaaccgctggagtcgatcatggctcgagttgtggcaagc
agtctgtttactctcggctgtttagccgtgtggggcatttggcagtggcgtaagttgcaa
gccttcaaatcggagcaaaagcgcgaagagcaactgcgccaagatccgatcaaggtgtat
gagcagcgccaagaggttgaactgaatcaggtgatgctcaatatgaagcagagcctaaat
aaacacaactacttgtatgcactaccttggtatttggttctaggtttagaaaatgcgggt
aaaaccagcctgatcaaccgttctggtcagaactttgtcttctcttcggtcatgcgagct
tcgggacaaaaaagcgaaaacccatactcgtttgattggtggattggtgatgaatctgtc
ctgattgatcctgatggtgagctgttaacgcaaggcaatcgtagtgaagaaaatgatggt
gcgttagagcgccgcttatggttgcattttgtcgattggctagaccgcactcgtagccgc
cgcccgttaaacggcatcgtgttggcgttggatgtggcgcatcttgctaccgccaccgcc
tcagagcgtaaagcttatgccaatttgctgcgtgctcgtctgcgtgagttgatggaaacc
ttatcgactcgtctgccggtgtacattgcactgactaagctcgacttactgcacggtttt
gagcctttctttaagcactacaccaaaagtcagcgcgaagaggtgttgggttttaccttc
tcaatggattcggtagataacctagattcatggttggaagagtttgccagtgagtacact
caatttgtgtcacgagttaatggcatgctgccgcatgcggtcgcagcgccaatgacgctt
gaagaacgtaacgcgatttacagcttcacgcgtcaaatctcaggtttgaaagagattttg
caacagtttttccaagaggctttggcgagcgatcaattctcaacgtcagcgctggtgcgt
ggtgcctatttcacgtcggtttaccaacaaggtgtacctaccaacgcttttgatgatgcg
gcttcccgtcgttatggtctgtctcatgcgattaatacggcgcagcgcgcgaaaaactcc
acggtctatttcacgcaaaaactgtttacccacatcatttatcctgaagcgggtttagcg
tcggataatttccgggttgcaaaaaacaaacgccgtttgatggggctctcttttgtcgca
tgctcagtggcgactttgctgttggcgggaacttggcatcgtaactacctcaataacgtg
caacacgccgatactgtattaaccaaagtgaatcagtataaagagcagttcccgaccagc
cgttcattggcctcacaaagagaggtattggatccgttgaacaagatccgtgaggcgaca
ctggagtttggtttcttccgtgataaacctcagtacatctccgattttggtctctaccaa
gggcacaccattggcccgaaagtagaagagacctacttaaacttactcgaaactcgcttc
ttgcctctgttgatggcggacaccattgttgcgctcaatcaagctgagacagatgaagaa
aaattagcggtgctgcgtgtgtatcgcatgctggtcgataaaagtggtcgttaccaagac
tatgtgatggattattttgcgaagtattggcaaaaatccttctcaggtcagcgtcaaatt
caggaagagctgctcggccacttagattacgcgatgcgtcatacggacctcactgcagag
aggctcaatggtgataaaggggcggagcaggtgatgcgcccttacgataaagtgattgct
cgtgctcaggttgaactgggttcaatgccaaacgaccagcgcgtctatcgtaacttgaaa
ttgagcgcacaaacggtgcttggtccttcggttaacttgcgtagcttgattgggccggtg
ttcgatgtggtgtttgaagagcgcgttcttaacagtagcagcctgtttattcctcaaatg
ctcaccaagcgtggttttgatgactactttatgccgcaatctgaatcggtctctgagctg
gcactgattgacagttgggttctgggacagagcaaaacggcacagtttagtgaagcagac
aagcaggcactgcgcgaaaaaatccgcgatctttatgtggcggattacaccaacacatgg
cgcgcggcactcaatgaaattgatgtgaagtatttcaatgacatcaatgatgcggtcatg
gttttggaaaatatcaccagtaaccttgagccgatgcagcgtctactgcgcacattagat
gacaacacccaactgtacagtgcgttacctaaagatgaatcggcgttaaaagagctgctg
aaaagtccgaaatacaaagtggcttcgatgattgaaactccgtttgctgatctgaacggt
atgctcaaaccggtgggcagcaaaccagcgtacatgacggaagtcttggcttcggtggat
gagctgaaaagctacttgaaatcgattcaagatgctcccgatgtcggtatggcggcgctc
gatgcgaccaaagcgcgggtcaaactggttaatgctgaccctatctataccttaaaacgt
atctcgtcaggactgccgaagccgctggatagcatgatggcaaagcttgcagatgagagc
tggtatgtggtcaagcaagaagcgatcaagcatctggaagttcgctggacggaggatgtg
tataaaaccttccaaagcaagctggctgggcgttatccattcaaccccgcatcaaataaa
gatgttgccttggccgattttgaagccttctttgcgccgaatggcacgttagacaacttc
tacaatcagcaactgaagatgtttattgatgagaacatcagcgtcgcgtcggatgactca
gcgcagtcgatcattcgtaaagaagtgctggatcagatcaagcaagcgcagaaaattcgt
gaggctttcttcaaccgtaaagggattttggatgtcagcttctcggttgagccgctcagt
ttgagtaacaacaagcgtcgtagtgtgctgaatgtggatggtcagttcttagcttacagc
catggtccgcgtgaaaatgtggagctgatttggcctaacacgctgcgtgattctgcggtg
tctaaggtgaccttgattccaacccaaaccaatatgtcaccgcgcagtttgcaaatccaa
ggaccgtgggcattcttccgcttattggatcaaggtgatgtggtttcggcgagtcaaacg
tcggttgatttcaaatttatcgtcgatggcggtgagatgatctaccgtattaacgcagag
gccgatgccaacccatttaccgaacgcctgttcaagtcgttcaaactgtctaaaacactc
tattaa

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