KEGG   Vibrio cholerae O1 MJ-1236: VCD_002447
Entry
VCD_002447        CDS       T00903                                 
Name
(GenBank) SSU ribosomal protein S1p
  KO
K02945  small subunit ribosomal protein S1
Organism
vcj  Vibrio cholerae O1 MJ-1236
Pathway
vcj03010  Ribosome
Brite
KEGG Orthology (KO) [BR:vcj00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    VCD_002447
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:vcj03011]
    VCD_002447
Ribosome [BR:vcj03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    VCD_002447
  Bacteria
    VCD_002447
SSDB
Motif
Pfam: S1 Spt6_S1 PCB_OB DUF1344
Other DBs
NCBI-ProteinID: ACQ60613
Position
1:1562296..1563966
AA seq 556 aa
MTESFAQLFEEFLNETQFQQGTIVKGTVVAIENGYVLVDAGLKSESAIPAEQFKNAAGEL
EVQVGSQVDVALDAVEDGFGETQLSREKAKRHEAWIVLEKAYEEAATVIGIINGKVKGGF
TVELNGIRAFLPGSLVDVRPIRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESSV
ERDELLETLQEGTEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE
ILVKVLKFDRDRTRVSLGLKQLGEDPWVAIAKRYPEGHKLSGRVTNLTDYGCFVEIEEGV
EGLVHVSEMDWTNKNIHPSKVVNVGDEVEVMVLDIDEERRRISLGLKQCKANPWQSFAEA
QAKGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAVVL
AVDAERERISLGIKQMENDPFNAYVSDNKKGALVNGTVTAVDAKGATIELEDGVEGYIRA
SEVSRDRIEDASLILNVGDKVEAKFTGVDRKNRVINLSIKAKDEAEEQEVMATLNKQDEA
AFGNAMADAFKAAKGE
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgactgaatcttttgctcaactctttgaagagtttctgaacgagacccaattccaacaa
ggtactatcgttaaaggtactgtagtagcaatcgagaacggctacgttctggttgatgct
ggcctgaagtctgagtctgctatccctgctgaacaattcaagaacgctgctggcgaacta
gaagttcaagtaggttctcaagtagacgtagctctggacgcggttgaagatggtttcggc
gaaactcaactttctcgtgagaaagcgaagcgccatgaagcttggatcgtacttgaaaaa
gcttacgaagaagctgcaactgttatcggtatcattaacggtaaagttaaaggcggtttc
actgttgaactgaacggtatccgtgcgttcctgccaggttctctggttgacgtacgtcca
atccgtgacactgctcacctagaaaacaaagagctagagttcaaagttatcaagctagac
cagaagcgtaacaacgttgttgtttctcgtcgtgcagttatcgaatctgaaagcagcgta
gagcgtgatgaactgcttgaaactctgcaagaaggtactgaagttaaaggtatcgttaag
aacctgactgactacggtgcgttcgttgatctgggcggcgttgacggtctgctacacatc
actgacatggcttggaagcgcgttaagcatccatcagaaatcgttaacgttggtgacgag
atcctagttaaagtactgaagttcgatcgtgatcgtactcgcgtatctctaggtctgaaa
cagctaggcgaagatccatgggtagcaatcgctaagcgttacccagaaggtcacaaactg
tctggccgtgtaactaacctgactgactacggctgcttcgttgaaatcgaagaaggcgtt
gaaggtctagtacacgtttctgaaatggactggacgaacaagaacatccacccatctaaa
gttgttaatgttggcgacgaagttgaggttatggttctggatatcgacgaagagcgtcgt
cgtatctctctaggcctgaaacagtgtaaagctaacccatggcaatcattcgctgaagcg
caagctaaaggcgacaaagtaactggtaagatcaagtctatcactgactttggtatcttc
atcggtctagaaggcggtatcgacggtctggttcacctgtctgacatctcttggaacgta
ccaggagaagaagctgttcgtgaattcaagaaaggcgacgaaatctctgcagttgttcta
gcagtagacgctgagcgtgagcgtatttctctgggcatcaagcaaatggaaaacgatcca
ttcaacgcttatgtttcagacaacaagaaaggtgctctggttaacggtactgtaactgca
gttgacgcgaaaggcgcaaccatcgagctagaagacggcgttgaaggttacatccgcgct
tctgaagtatcacgtgaccgtatcgaagatgcatcactgatcctgaacgttggtgacaaa
gttgaagcgaaatttactggtgttgaccgtaaaaaccgcgtaatcaacctgtctatcaaa
gcgaaagatgaagctgaagagcaagaagtaatggcaactctgaacaagcaagatgaagct
gcgttcggtaatgctatggctgacgctttcaaagcagcgaaaggcgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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