KEGG   Vibrio cholerae LMA3984-4: VCLMA_A0193Help
Entry
VCLMA_A0193       CDS       T01871                                 

Definition
Formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
vcl  Vibrio cholerae LMA3984-4
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:vcl00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    VCLMA_A0193
Enzymes [BR:vcl01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     VCLMA_A0193
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     VCLMA_A0193
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
I:210357..211166
Genome map
AA seq 269 aa AA seqDB search
MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELKQLEGQTILAIHRRAKYLI
IETAVGSAIVHLGMSGSLRILDGDFPAAKHDHVDLVMTSGKRLRYNDPRRFGAWLWCAPD
ESHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGVGNIYANESLFISR
LHPLRPAHSLSLEEWQTLVANIKQVLQVAIKQGGTTLKDFTQSDGKPGYFAQELQVYGKA
KQPCPHCGEPICEQKIAQRNTFFCPQCQH
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacctgaagttgaagtcagccgtttagggatctccccacatttggtcggc
ggcaccattcaatccttagtgttacgtacgcccaagttgcgctggcctatccctcaagag
ctgaaacagcttgaagggcagactattctcgcgattcatcgacgcgctaaatatctgatt
attgaaaccgccgtcggcagtgcgattgtgcatttgggtatgtctggctcactgcgtatt
ttggatggcgattttcctgccgcgaaacacgatcatgtggatctggtgatgaccagtggc
aaacggctgcgctataacgatccgcgccgcttcggggcttggttatggtgtgcgcctgat
gagagccacgaagtgctcgggcgtttggggcctgagccgttgaccgaagcttttaacgct
gaatatatgatggacaaagcgcgcaacaaacgcattgcagtaaaagctttcatcatggac
aacgcagcggtcgtgggggtggggaatatctatgccaatgaatcgctgtttatatcacgc
ctccatccactgcgccccgctcattcgctgagcttagaggagtggcaaaccttagtggcg
aacatcaaacaagtgctgcaagtggcgattaagcaaggcggcaccacgctgaaagatttt
acccaaagcgatggtaagccgggctatttcgcgcaagagctgcaagtgtatggcaaagcc
aaacagccttgccctcattgtggagagccgatttgcgagcagaaaattgctcagcgcaat
acctttttctgcccgcagtgccagcattga

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