KEGG   Vibrio cholerae O1 LMA3984-4: VCLMA_A0263
Entry
VCLMA_A0263       CDS       T01871                                 
Name
(GenBank) DNA polymerase III epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vcl  Vibrio cholerae O1 LMA3984-4
Pathway
vcl03030  DNA replication
vcl03430  Mismatch repair
vcl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vcl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VCLMA_A0263
   03430 Mismatch repair
    VCLMA_A0263
   03440 Homologous recombination
    VCLMA_A0263
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcl03032]
    VCLMA_A0263
   03400 DNA repair and recombination proteins [BR:vcl03400]
    VCLMA_A0263
Enzymes [BR:vcl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VCLMA_A0263
DNA replication proteins [BR:vcl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     VCLMA_A0263
DNA repair and recombination proteins [BR:vcl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     VCLMA_A0263
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 Rv2179c-like
Other DBs
NCBI-ProteinID: AEA77577
Position
I:complement(290243..290872)
AA seq 209 aa
MNWLLRRYWHAKLKGSPYQRLFETARHHEYVSLDCETTSLDPKRAELVTIAATKIVDNRI
ITSQPFEVRLCAPQSLDSGSVRIHRIRHQDLHDGLSEKEALLQLIEFIGNRPLVGYHIRY
DKTILDIACRKHLGFPLPNRLIEVSQIYHDKLEKHLPNAYFDLSLEAICRHLDLPLQDKH
DALQDAIAAALVFVRLTKGDLPQFIAPGV
NT seq 630 nt   +upstreamnt  +downstreamnt
atgaactggttattacgccgttattggcacgcgaaactcaaaggttctccctatcaacgg
ctgtttgaaaccgcgcgccatcacgagtacgtctcgctcgactgtgaaaccaccagctta
gatcctaaacgcgctgagttagtgaccatcgccgcgactaagatcgttgataaccgcatt
atcaccagccaaccctttgaggtgcgcctgtgcgcgccacaatcgctcgactcgggttca
gtgcggattcaccgtatccgccaccaagatctgcacgatggtctaagcgaaaaagaggcg
cttctccaactgattgagtttattggcaatcgtcccttggtcggctaccacattcgttac
gataagacgattttggatatcgcctgtcgtaaacatctcgggtttccactccccaaccga
ctgattgaggtgagccagatctatcacgataaactggaaaaacacctgcccaatgcctat
ttcgatctcagtttagaggcgatctgccgccatctagatctgccactgcaagacaaacat
gatgcgctgcaagatgcgattgccgccgctttggtgtttgtgcgtttaaccaaaggcgat
ctgccacaatttattgcaccgggtgtgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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