KEGG T01871: VCLMA

Vibrio cholerae O1 LMA3984-4: VCLMA_A1438

Entry

VCLMA_A1438       CDS       T01871

Name

(GenBank) Microbial collagenase, secreted

K01387

microbial collagenase [EC:3.4.24.3]

Organism

vcl Vibrio cholerae O1 LMA3984-4

Brite

KEGG Orthology (KO) [BR:vcl00001]
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:vcl01002]
    VCLMA_A1438
  09183 Protein families: signaling and cellular processes
   02042 Bacterial toxins [BR:vcl02042]
    VCLMA_A1438
Enzymes [BR:vcl01000]
3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.24  Metalloendopeptidases
    3.4.24.3  microbial collagenase
     VCLMA_A1438
Peptidases and inhibitors [BR:vcl01002]
Metallo peptidases
  Family M9
   VCLMA_A1438
Bacterial toxins [BR:vcl02042]
Toxins that damage the extracellular matrix
  Hyaluronidases/Collagenases
   VCLMA_A1438

SSDB

Motif

Pfam:

Peptidase_M9 Peptidase_M9_N PPC SeqA_N

Other DBs

NCBI-ProteinID:

AEA78665

Position

I:1644975..1647431

AA seq 818 aa
MSFQQRIQHHPIALACVIAGLSYSSYSQAACEIQDLQPARDLPAQIALATQACYNSWFYA
PTATMDNLYSEASLAHLQTVLDAEIARYTGEAQQARRLENYGEFIRAAYYVRYNAGREPY
SQALSQRFAQSIDRFLRHPHAFDQGREQVGAMKSLSLMVDNVKQLPLTMDAMILALHRFN
RETAQDTQWVDGLNNLFRAMSGHVGNSEFYRYLAANTQHIDTLYRFALDNEWALETDAEF
LVYNALRETGRLLISPDAITKQKARHVMRQVIARYPLGSKHDKLWLAAVEMLHYYAPEVL
QQLGIDLDAAKRDLAARILPNRFECQGPAIIRSQDLSDSQAAQACDVLDKKEQDFHQVAN
TGLAPVADDYNTRVEVVVFANNSSYVNYSSFLFGNTTDNGGQYLEGNPADQNNQARFVAY
RYANDADLSILNLEHEYTHYLDARFNQYGSFSDNLAHGHIVWWLEGFAEYMHYKQGYQAA
VKLISQGKLSLSDVFATTYSNDTNRIYRWGYLAVRFMLEKHPQDVESLLALSRTGQFDQW
AQSVKLLGERYNTEFSAWLDTLQRDNPDNPDNPDNPDNPDNPDNPEQPNPEPNAVTQLAA
NSSLTLTGKAYSEHLFYVDVPEYSREFHVQISGEGDADLYMSYQQVAHYYDYQVTEFTYG
SNEQITFKPEQNGYIKPGRYYLSVTGRADYSAVILNTHLVTEQPNEQPTIKDDLAPVLLE
AGNSQSLTVHRQRYVAIYLPKGVSEVQVWLTASEQNRGNVDLFAAKAYWPTREQFEHAST
GAGSHEYLRIPVTQEGYVHFSLNAQQLGDTVEMVAYFD

NT seq 2457 nt +upstreamnt +downstreamnt
gtgtcttttcaacaacgtatccaacatcaccccattgctttggcgtgcgtcatcgctggt
ctttcttactcctcctattcacaagcagcttgtgagatacaagatttacagcccgcgcgc
gatcttcctgcgcaaattgccttggctacacaagcttgttacaactcatggttttacgca
ccaacggcaaccatggataacctctatagcgaagcttctctagcgcatttacaaactgtg
ctcgatgctgaaattgctcgctatactggtgaagcgcagcaagctcgtcgcttggaaaac
tatggtgagttcattcgcgcagcgtattacgtgcgttataacgctgggcgtgaaccttat
tctcaagcactcagtcaacgctttgctcaatcgatcgaccgctttttacgtcatccgcat
gcttttgaccaaggccgtgaacaggtgggcgcaatgaagagcctaagtttaatggtggat
aacgttaaacagttaccgctcactatggatgcgatgatcttagctctgcaccgcttcaat
cgagaaacggcgcaagatacacaatgggtcgatggtttaaataacttattccgtgcgatg
tctggccatgtgggtaactcggagttttaccgctacttagccgccaacacccaacatatt
gataccttgtatcgattcgctctggacaatgagtgggcattagaaaccgacgctgagttt
ttggtttacaacgctctgcgtgaaactggccgcttattgattagcccagatgccatcacc
aagcaaaaggctcgtcatgtgatgcgacaagtgattgctcgctatcctttagggagtaaa
cacgacaaattgtggttagctgccgttgagatgttgcactattacgcacctgaggtgctg
caacagctcggtatcgatcttgatgcagcgaagcgcgatttagccgcgcgcattttgcca
aaccgctttgaatgccaaggccctgccattattcgctcgcaagatctttccgattcgcaa
gccgcgcaagcctgtgacgtattggataaaaaagagcaagattttcaccaagtggcaaat
acgggattggcaccggtcgctgatgattacaacactcgcgttgaggtggtggtgtttgcc
aataacagcagctatgtcaattactcctcgtttttatttggcaataccactgacaatggc
gggcagtatttagaaggcaaccctgcggatcaaaacaatcaagcccgctttgtcgcctat
cgttatgccaatgatgcggatttgtcgattctcaatttagagcatgagtacactcattat
ctggacgcgcgcttcaaccagtatggttcgttcagtgataacttagcccatggtcatatt
gtgtggtggttagaaggtttcgcggaatatatgcattataagcagggctaccaagcggcg
gttaagctgatttctcaaggtaaattgagcctttctgatgtgtttgccaccacctactcg
aacgacacaaaccgcatttatcgctggggctacttagcggtacgctttatgttggaaaag
catccacaagacgtggaaagcttgctggcactctctcgtactgggcagtttgatcagtgg
gcacagagtgtcaaattgctgggtgaacgctataacaccgagttttcggcatggctggat
acattgcaacgcgataatccagataatccagataatccagataatccagataatccagat
aatccagataatccagaacagcctaacccagaacccaatgcggtcactcagttagcggcc
aattcgtccttaacactgacaggaaaggcgtacagcgagcatctgttctatgtggatgtg
ccagagtacagccgagagttccacgttcagatctccggggagggagatgccgatctgtac
atgagctaccagcaggttgcccattactatgattatcaggtaacggaatttacctatggc
agcaacgagcaaattaccttcaaacctgagcagaatggttacatcaaacccggacgctac
tatttaagtgtgacaggacgtgcggattactcagcagtcatcctcaacacacacctagtc
actgaacagcctaatgagcaaccgactatcaaagatgatcttgctcctgtgcttttagaa
gcgggtaacagtcaaagccttaccgtgcatcgacaacgttacgtcgccatctacttgcca
aaaggcgtcagtgaagtacaagtatggctcaccgcttcagaacaaaaccgaggcaatgtc
gacctgtttgcagcaaaagcgtattggccaactcgagagcagtttgagcacgcctcaact
ggtgcgggcagtcatgagtatttgcgtatccctgtgacacaagaaggttatgtgcacttt
tcgttaaacgcacaacaactcggcgacacggtcgaaatggtggcctatttcgactga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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