KEGG T01871: VCLMA

Vibrio cholerae LMA3984-4: VCLMA_A1479

Entry

VCLMA_A1479 CDS T01871

Definition

Alpha-1,6-galactosidase, putative

Orthology

K07407

alpha-galactosidase [EC:3.2.1.22]

Organism

vcl Vibrio cholerae LMA3984-4

Pathway

vcl00052	Galactose metabolism
vcl00561	Glycerolipid metabolism
vcl00600	Sphingolipid metabolism

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:vcl00052]
Metabolism; Lipid metabolism; Glycerolipid metabolism [PATH:vcl00561]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:vcl00600]

SSDB

Motif

Pfam:

Melibiase Glyco_hydro_31 Raffinose_syn GHL6 DUF187

Other DBs

NCBI-GI:

384424744

NCBI-GeneID:

12268808

UniProt:

F2IL91

Position

I:complement(1692743..1694479)

AA seq 578 aa
MSHLRLANGREILAQQADIELEISDNELSAQYIGLHNRPFERRYPLFSTVLDVESDARLV
GDGFQMLSQASGTLSHIQEVGRCPDNNLSYRIYPHDAPKRFYNTLMIEAAGRYLLFGFTS
CRRFAGFFEVHRHPQHWILSAFIDGEETRPQDWVTNQLESVICLEGESMSELYQAYAEAI
SRHHPPRPHLKDPAPMGWCSWYAYYAEVTEQDIKDNVAVLAQRHPELEWVLLDDGYQAFM
GDWLTPSQKFPSGIEQVIADIRAQGKKPAIWLAPFIAEADSAVFRQHPDWFVKNAAGQPL
KAEEITYGGWRCTPWYVLDGSHPDVQEHLTQVVKTLREEWGVELFKLDANYWGTLQGQRF
QSGVTGVEAYRMGMQAIAEGAGDGWLLGCNAPMWPSLGLVDAMRVSDDVERNADRFCQIA
RETLMRSWQHRQLWQIDPDCLTLTSLPNQSADRASYEFHRNLLLASGGLLLSGDPLPKLT
PFAKQSLKRLLKRFQYSQKAAKITSLSMRHAFLPLTDKNDLHCLFNFNGKAQEFTLVANH
PVQWYDYWTGEQLSSEPSKLLIVNLEKGLQSRAIFTVG

NT seq 1737 nt +upstreamnt +downstreamnt
atgagccacttaagactagccaatgggcgagagatcctagcgcagcaagccgatattgaa
ctggagatttcggacaatgagctctccgcacagtatattgggttacacaatcgtcctttt
gaacgccgttatccgctatttagcacggtgttggatgtcgagtcagatgcgcgcttggtc
ggtgatggtttccaaatgctctcacaagcctctggaacgctaagccatatccaagaagtc
gggcgttgtcctgataacaatctcagttaccgcatctaccctcatgatgcgccaaagcgt
ttttacaatactttgatgatagaggccgctggccgttatttgttgtttggttttacttct
tgccggcgatttgcgggcttttttgaagtgcatcgtcatccgcaacactggatactgagt
gcttttattgatggagaagagacacgtccgcaagactgggtcaccaatcagttagagtcg
gtgatttgcttagaaggtgaatccatgtcggagctttaccaagcctatgcagaggcgatc
tcgcgccatcatccaccaagaccccatctcaaagaccctgcaccgatgggctggtgttct
tggtatgcctactatgcagaagtcaccgaacaagacatcaaagataacgtggcggtatta
gcacagcgtcaccctgagctggaatgggtgctattggatgacggctatcaagcctttatg
ggcgattggcttacgccatcccaaaaattccccagtggtattgagcaagtgattgccgat
attcgcgcacaaggtaaaaagcccgctatctggcttgccccttttatcgcggaagcggat
tctgcggtctttcgtcagcacccagactggtttgtgaaaaatgccgcaggtcagccactc
aaagccgaagagatcacttatggcggttggcgctgtacgccttggtatgtgttggatggt
tctcatccggatgtgcaagagcacttgacccaagtggtgaaaaccctgcgtgaagagtgg
ggcgttgaactgtttaagctggatgccaactactggggaacgctacaaggccagcgtttt
caatcgggtgttacgggtgtagaagcgtatcgaatgggcatgcaagccatcgcggaaggc
gcaggcgatgggtggctactcggttgtaatgcgccgatgtggccttcactgggtttggtg
gatgcaatgcgtgtgtcggatgatgtagagcgcaatgccgatcgcttttgccaaattgcg
cgtgaaaccttaatgcgcagttggcagcaccggcaactgtggcaaatcgatccggattgc
ttaacgctcacctcgctgcccaatcaaagtgccgatcgcgccagctacgaattccaccgt
aatttgctgcttgccagcggtggtttgctattgtcaggcgacccactgccgaaattaaca
ccgtttgcaaaacagagcctgaaacgtttactcaaacgattccaatacagtcagaaggcg
gccaaaatcacttccttgagtatgcgccatgccttcttaccgctgaccgataagaatgat
ctgcactgcttgtttaacttcaacggtaaagctcaggagtttaccttggtcgccaatcat
ccggtgcaatggtatgactattggacaggagagcaattaagcagcgaaccttccaaactg
ctcatcgttaacttagagaaggggttacaaagccgcgccatttttacagtgggttag

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (20)   
   KEGG COMPOUND (20)   
Chemical reaction (13)   
   KEGG ENZYME (1)   
   KEGG REACTION (12)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (48)   

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