KEGG T01871: VCLMA

Vibrio cholerae LMA3984-4: VCLMA_B0633

Entry

VCLMA_B0633 CDS T01871

Definition

periplasmic alpha-amylase

Orthology

K01176

alpha-amylase [EC:3.2.1.1]

Organism

vcl Vibrio cholerae LMA3984-4

Pathway

vcl00500	Starch and sucrose metabolism
vcl01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Starch and sucrose metabolism [PATH:vcl00500]

SSDB

Motif

Pfam:

Alpha-amylase

Other DBs

NCBI-GI:

384423147

NCBI-GeneID:

12269702

UniProt:

F2ISX4

Position

II:693819..695891

AA seq 690 aa
MKLNALTLSLLSALALPALASSASTANLTVATTTNSRDFPLQADEPLVIPLTKGDYTLTI
SGIGGDCPPAPEQEIKFNTPIALNCHVPTQLPLSVRFTGDYAFQWQAQNNTLTFVRQTTK
AAKTEFRRPIPNVSCEVYQGGEVTLDLASSFADGTELQDAMTGQVVTVEQGKVRLTPSAN
SGGLVLLEPKQTAKAEPKQPFTYRNANIYFVMVDRFYNADPSNDGSYGRHKDGQEEIGTF
HGGDLKGVIAKLDHIQSLGTDAIWLSPIVEQVHGFVGGGEKGSFPFYAYHGYWTRDFTKI
DANFGKDEDLQTLVREAHRRGIKILMDAVINHAGYATLADLQQDAVQVVNAPMLPERWND
WKPSADENWHSFHQAIDYQSKNWQQWWGPDWVRAGLPGYPAPGSSDITMNLAGLPDFRTE
STQAVTPPQWLLNNPGTRVVSKPNYTVADYLIEWQSDWVRRFGIDGFRIDTVKHVEGEVW
QRLKQRATESLAAWRKDNNQSGEPFWMMGEVWGHAAYRSPYFDDGFDALINFDIQKRMDN
GAACLSQMAMVYRDYAQTLAKYPDFNPVSYMSSHDTELFFGRFKSLDMQRNAANALLLTP
GAIQVYYGDEVAREAGPYADDFHQGTRSDMPWEWNAERQALLKHWQTLGQFRQRHPAIGA
GDHREIAQSNAYVFTRTLGEDKVVVAFVGR

NT seq 2073 nt +upstreamnt +downstreamnt
atgaaactgaacgccttgaccctatcgctgctctcagctctagctttgccagcactggcc
tcgtcggcttccactgcgaatttaacggtagcaaccaccaccaacagccgtgattttcca
ctgcaagccgatgaaccactggtgatcccgctcactaagggcgactacaccttgaccatt
agcgggattggcggtgattgcccaccagcccccgaacaagagatcaaattcaatacgccc
atcgctctcaattgccatgtcccgactcagttacctttgagtgtccgttttaccggggat
tacgcatttcagtggcaagcgcaaaacaatacgctcaccttcgtgcgtcaaaccactaag
gcagccaaaactgagtttcgtcgcccgatcccaaacgtcagttgcgaagtatatcaaggc
ggtgaagtgactttagatctggcgagcagctttgccgatggaaccgagttgcaagatgct
atgactgggcaagtagtgaccgtcgagcaaggcaaagtgcgcttaaccccttccgctaac
agcggcggcttggtgttattggaacctaaacagacagcaaaagccgagcccaaacagccc
tttacctatcgaaatgccaatatttattttgtgatggttgatcgcttctacaacgcagac
ccaagcaatgatggcagttatggtcgccacaaagatggccaagaggagatcggaacgttt
catggcggcgatctcaagggtgtgattgcaaaacttgaccatatccaaagcttaggcacg
gatgctatctggctctctccgattgtcgaacaggtacatgggtttgtcggcggtggtgag
aaaggatcattcccgttttatgcctatcacggctattggacccgcgatttcaccaagatc
gatgccaactttgggaaagatgaggatctacaaaccttagtgcgtgaggcgcatcgtcgc
ggcattaaaattttgatggatgcggtgatcaatcatgcaggttacgcgacactcgccgat
ttacagcaagatgcggtacaagtggtgaacgcacctatgctgcctgaacgttggaatgac
tggaaacccagcgccgacgaaaactggcacagtttccatcaagccattgattaccaaagc
aagaattggcaacagtggtggggaccagactgggtacgcgcaggcttaccgggctatcct
gcgccgggcagtagtgacatcaccatgaatctcgccggtttaccggattttcgcactgaa
tcaacccaagccgttaccccgccgcagtggctactcaacaatcccggcacacgagtggtg
agcaaacccaattacactgtcgctgactatttaattgaatggcaaagcgattgggtacgc
cgctttgggatcgacggttttcgcatcgacaccgtcaaacatgtggaaggggaagtgtgg
caacgcttaaaacagcgcgcgacggaaagccttgcagcgtggcgtaaagacaataatcaa
agcggtgagccgttttggatgatgggcgaagtgtgggggcacgctgcctatcgcagccct
tactttgatgatggctttgatgcactgattaactttgacattcaaaaacgtatggataac
ggtgcagcctgtttgagccagatggcgatggtgtatcgcgattacgcgcaaaccctcgcc
aaatatcccgactttaaccccgtcagttatatgtcttcgcacgatactgagctgtttttc
ggacgctttaaatcactggatatgcagcgtaacgccgccaatgccctgctattgacaccg
ggtgctatccaagtgtattacggcgatgaagtcgcccgcgaagcgggaccgtacgcagac
gatttccatcaaggcactcgctctgatatgccttgggaatggaatgccgaacgccaagca
ctgctcaagcattggcaaaccttaggccaattccgtcaacgtcaccctgcgataggagcg
ggagatcatcgcgaaatcgcccaatccaacgcttatgttttcactcgtacattgggtgaa
gataaggtggtcgtggcgttcgttggccgctaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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