KEGG T00891: VCM66

Vibrio cholerae M66-2: VCM66_2242

Entry

VCM66_2242 CDS T00891

Gene name

recD

Definition

exodeoxyribonuclease V, 67 kDa subunit (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

vcm Vibrio cholerae M66-2

Pathway

vcm03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:vcm03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 AAA_19 Helicase_RecD AAA_11 Viral_helicase1 DUF2075 AAA_22 UvrD-helicase AAA_16 AAA_28 AAA_25 T2SE NTPase_1 TrwB_AAD_bind AAA UvrD_C AAA_18 DUF87 AAA_17 CbiA

Other DBs

NCBI-GI:

227082443

NCBI-GeneID:

7773504

UniProt:

C3LQ91

Position

I:complement(2403529..2405649)

AA seq 706 aa
MMFWDSEVAKRLLAQGALRPLDVQFARFIGKQAVLAGHNAAESELLSVLSAALSAELGRG
HICLPLCDAQGNRCDLAALIGLYGEASLQHSERWLAVDWQALLQASPLVGQQGEAVPLMF
DGSRLYLHRYWHYEKQLAARLTELAAPQRLSPAELANLRERLNTLFARDYLGLWQALQQK
PLSSVERIQLLNDRLDVVESDALDWPAIEAVVEKAQRAADLQALEQLIPLTHCLNWQKVA
AAVALTRRFAVISGGPGTGKTTTVTKLLAALISQSMAQGKVPEIKLIAPTGKAAARLTES
MGKAVSQLAIEPEIAAAIPSSSSTIHRLLGAIPGSAEFRHHTRNPLHLDLLVVDEASMVD
LPLMVKLVEALPKHARLILLGDKDQLASVEAGAVLGDICTFLNQGYGHEQGAQLAELTGF
ATLRQTASKTVNPVADCLCMLQKSYRFDARSGIGQLAKAINSGSPARVEAVWQQSFSDIE
HFALSGEHYQQLLQTLVQAYRPYLSLLNQPTEQFESTQQSMLTLAKSALDAFSRCRLLCA
LREGDFGVMGLNTRIERALNAHKLIKTQEEIWYHGRPIMVTRNDHGLGLYNGDIGLCMRD
RDDDQGRLKVYFELPDGSIKAVLPSRVPQHETAYAMTIHKSQGSEFDLTLLILPPDYSPI
LTRELVYTGITRAKKQLKLYCDNKVLQRAIKVKTQRASGLVARLEQ

NT seq 2121 nt +upstreamnt +downstreamnt
atgatgttttgggatagcgaagtagcgaaacgtctgctggcacaaggcgcgctgcgtcct
ttggatgtgcagtttgcccgctttattggcaagcaagccgtattggcagggcacaacgct
gcagaaagtgagcttttgagtgtactgagcgcggcgctcagtgcagaacttgggcgtgga
cacatctgtctgccactgtgtgatgcacagggtaatcgttgcgatctagcggcgctgatt
ggtctttatggtgaagcgagtttgcagcacagtgaacgctggttagcggtagactggcaa
gccttactgcaagcctcgccgttggtggggcagcaaggtgaagcggtgccgttaatgttt
gatggctcaaggctctatctgcatcgctactggcattatgaaaagcaactggcggcgcga
ttgactgagttggccgcaccccaacgtttaagccctgctgaactggctaacttgcgtgaa
cgcctgaataccttatttgcccgcgactatttaggcttgtggcaagcactacaacaaaag
ccgctaagttcggtcgagcggattcaactgctgaatgatcgattggatgttgtggagtcg
gatgcgctggattggccagcgattgaagctgtagtcgaaaaagcgcagcgtgccgcggat
ttgcaagctttagagcagcttattccgcttactcactgcttaaactggcaaaaagtggcg
gccgctgtcgctcttacccgccgttttgcggtgatttccggtgggccgggaaccggcaaa
accaccacagtgaccaagcttctggcggcgctgattagccaaagcatggcgcaaggtaaa
gtgccagagatcaaattgatcgctccaaccggtaaagccgcggcacggttaaccgaatcg
atgggtaaagcggtgagtcagctggcgatagagcctgagatcgccgcggcgatcccgagc
tcttccagcaccattcaccgtttgcttggcgcgattccgggcagcgctgagtttcgtcat
catacacgtaatccactccatcttgatctgttggtggtggatgaagcgtccatggttgac
ttgcctttgatggtgaaactggtcgaagcgctacccaagcacgctcggttgattttgctc
ggcgataaagatcaattggcttcggtggaagcgggggcggtgctcggtgatatttgtacc
ttcctgaaccaaggttacggccatgagcagggcgcgcagttggctgaactgacggggttt
gccactctgcgccaaactgccagtaaaacggtaaacccggtggcggattgcttatgtatg
ctgcaaaaaagctaccgttttgatgcgcgatctggcattggtcaattggcgaaagcgatc
aacagtggatctccggcgcgcgttgaagcggtgtggcaacagtcgttcagcgatattgaa
cactttgcccttagtggtgagcattatcagcaactgctgcaaaccttagtgcaggcttat
cgtccttatctgagcttgcttaatcagccaactgagcaatttgagtcgacccaacaaagc
atgctcacacttgccaaatcagcacttgatgcgttcagtcgctgccgattgctctgtgcg
ctgcgtgaaggcgattttggagtgatggggctgaacactcgcatcgaacgggcgttgaat
gctcacaagctgattaaaacgcaagaagagatctggtatcacgggcggccgatcatggtc
acgcgtaacgatcatggtttggggttatacaatggcgatattggcttgtgtatgcgcgat
cgtgacgatgatcagggcagactgaaagtctattttgagttgccggatggcagcattaaa
gccgtgttgccgagccgagtcccgcaacatgaaaccgcgtatgcgatgaccatacataaa
tcgcaaggcagcgaatttgatttaactttgctgattttaccgccggattacagtccgatt
ctgacgcgtgagttagtttacacggggatcacaagggcgaaaaaacagctcaaattgtat
tgcgataacaaggtattgcagcgagcaattaaagtgaaaacccaacgggcgagtggctta
gtggcaaggttggagcagtaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (21)   
   Pfam (21)   
All databases (30)   

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