KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_79408
Entry
VOLCADRAFT_79408  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K03124  transcription initiation factor TFIIB
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    VOLCADRAFT_79408
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vcn03021]
    VOLCADRAFT_79408
Transcription machinery [BR:vcn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     VOLCADRAFT_79408
 Prokaryotic type
  Archaeal type
    TFB
     VOLCADRAFT_79408
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon RB_B Cyclin_N HTH_48
Other DBs
NCBI-GeneID: 9618367
NCBI-ProteinID: XP_002946810
JGI: 79408
UniProt: D8TKC4
Position
Unknown
AA seq 303 aa
MSQSCGTVKESRLIDERSEWRTFSDKDKDTTDPNRVGGPTNHLLEGLTTTIGRERNDGGL
SYTLNRIHARTNNPDRVIMAAMKEVGRMCELLKVNGTVKDRALEIYKEVVEAKTLKGRSV
KALAASCLFWACRQEKQARTFKQIVAVLGNDVSKKEIGRCFKDLQQLKKDELHKQGASAD
ALASTMNQTVQHPAEFVRNYCNHLRLEFKCKKLAEEIAQNAKPQDRRVPWDGRTPTSIAS
AIVFIAMMLWEIKKEEGQAGAGGSAGQPAFASLKAAKARADSAMQKVAIISSVAEATIRA
AYK
NT seq 909 nt   +upstreamnt  +downstreamnt
atgtcacagagctgcggaacagtgaaggaatcccggctaatcgacgagcgctcggaatgg
cgcacgttcagcgataaggacaaggacacgactgaccctaatcgtgtcggtgggcctaca
aaccatctgctggagggacttacgaccacgattggacgcgagcggaatgacggcggcctg
tcttacacgctcaaccgaattcatgctcgtaccaacaacccagatcgggtcatcatggcg
gcgatgaaggaggtcggccggatgtgcgagctgctcaaagtcaacgggacggtcaaagat
cgcgcattggaaatttataaagaagtggtggaggctaagacgctcaagggccgttccgtt
aaggctctcgccgcctcctgtctgttctgggcatgtcgccaggagaagcaggcgcgcacg
ttcaagcagatcgtggcggtgcttggaaacgacgtgagcaagaaggagattggccgctgc
ttcaaggacctgcagcagctcaaaaaggacgagctgcacaagcagggcgcttcagctgac
gcgttggcgtccaccatgaaccagactgtacagcaccctgcagagtttgtgcgcaactac
tgtaaccacctgcggttggaattcaagtgcaagaagctggcggaggagattgcgcagaac
gccaagccacaggaccgccgtgtcccatgggacggtcgcacgcccacgtccatcgcatcc
gccatcgtgttcatcgccatgatgctgtgggagatcaagaaggaagagggccaggcgggg
gctggcggctcggctgggcagcccgctttcgccagcctcaaggccgccaaggcacgagcg
gatagcgccatgcagaaggtcgccattatctcttccgtagcagaagccaccattcgagcc
gcgtacaag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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