KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_80930
Entry
VOLCADRAFT_80930  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VOLCADRAFT_80930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcn03019]
    VOLCADRAFT_80930
Messenger RNA biogenesis [BR:vcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     VOLCADRAFT_80930
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     VOLCADRAFT_80930
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 9619644
NCBI-ProteinID: XP_002950174
JGI: 80930
UniProt: D8TUL0
Position
Unknown
AA seq 320 aa
MTATWLTATGETLRVREVWEDNLEAEFTLIRDFVDQYPYVAMDTEFPGVVAKPLGPFKSS
REYLYRALKMNVDMLKLIQLGLTFTDAKGNLPRANGELCVWQFNFKGFRLADDVYAQDSI
ELLKQSGIDFATHEAKGIDVHRFGELLMTSGIVLNDDVRWITFHSNYDFGYLLKILTCQP
LPQSEQEFFELLNIYFPNIFDIKYLMRYCDNLHGGLNKLAEMLEVQRIGPQHQAGSDSLL
TSFTFIKLANKFFQGIEGASKHMGVLFGLGKWGRTRTLRPGKDSVWRADEGMARCRESSH
ELEVNADTHAAKGLKRSLRV
NT seq 963 nt   +upstreamnt  +downstreamnt
atgaccgccacgtggctgaccgccaccggcgagacactacgcgtgcgagaagtatgggaa
gacaatttggaggcggagttcaccctcatccgcgactttgtagaccagtatccttatgtg
gccatggacacagagtttccgggggtggtggccaagcccctgggcccattcaagagcagc
cgggagtatctctaccgggcgctcaagatgaacgtagatatgcttaagctgattcagctg
ggcctgacatttacggatgcaaaggggaacctgccgcgtgcgaacggagagctgtgcgtt
tggcagttcaactttaaggggttccgtcttgcggacgatgtctatgcacaggacagcatt
gagctgcttaaacaatcgggcatcgactttgctacacatgaggcgaaaggcattgacgtg
caccgttttggggaactgctcatgacgtctggtatcgttctcaacgatgacgtgcgatgg
attaccttccacagcaactacgactttgggtacctcttgaaaatcctgacctgccagccg
ctgccccagtctgagcaggagttttttgagctcttgaacatctacttccccaacatcttt
gacatcaagtatctcatgcggtactgcgacaatctccacggcgggcttaacaagctggcc
gagatgctggaagttcaacgtattgggcctcagcaccaggccggctcggacagcctcctt
acctcgttcaccttcatcaaactggccaacaaattctttcagggaatcgaaggcgcgtcc
aagcacatgggggttttgttcggcttgggtaagtggggaaggaccaggaccctacggcct
gggaaagactcggtttggagggcagacgaggggatggcgcgatgcagagaaagctcacat
gagcttgaggttaatgcagacactcatgcggcaaaagggctgaaaagatctcttcgggtt
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (72)   
   KEGG ORTHOLOGY (1)   
   RefGene (66)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (80)   

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