KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_82654
Entry
VOLCADRAFT_82654  CDS       T01330                                 
Symbol
katA
Name
(RefSeq) katanin catalytic subunit, 60 kDa
  KO
K07767  katanin p60 ATPase-containing subunit A1 [EC:5.6.1.1]
Organism
vcn  Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:vcn04812]
    VOLCADRAFT_82654 (katA)
Enzymes [BR:vcn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.1  microtubule-severing ATPase
     VOLCADRAFT_82654 (katA)
Cytoskeleton proteins [BR:vcn04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     VOLCADRAFT_82654 (katA)
SSDB
Motif
Pfam: AAA AAA_lid_3 Vps4_C KATNA1_MIT RuvB_N AAA_22 AAA_5 AAA_14 AAA_18 AAA_16 Mg_chelatase TIP49 IstB_IS21 AAA_25 AAA_24 TsaE nSTAND3 AAA_7 RNA_helicase AAA_2 AAA_33 PhoH AAA_17 AAA_28 DUF815 Parvo_NS1
Other DBs
NCBI-GeneID: 9626030
NCBI-ProteinID: XP_002954084
JGI: 82654
UniProt: D8U666
Position
Unknown
AA seq 564 aa
MAAEVQAITIAVTAGRDCAMTGDYSASVTYYENAVDSTTRYIRMLGDPHAIRQWTALLHQ
LQEEFSIVRQCDKEARGMRMDPGVSRSNSYQDMGDARGSSSYDDGYRQPIVVCHNPGQSQ
DDPMVWRPPTREGRGGGVAFRAPAGRARASQDDNRQMPSWANNGGGGRGGNSGGPSGRSS
SAQRRPTGSANPGGGANQGSYDKPWRQNMAGKGNAAGAAGGKGGGPGGAAPGNKKQYIGP
DQELATMLERDIIDQGINIKWDDIAGLEEAKRVLNEALVLPMIMPDFFTGIRRPVKGVLL
FGPPGTGKTMLAKAAATETSCTFFNVSSATLASKYRGESERMVRVLFDMAREMAPSMIFI
DEVDSLCSQRGTANEHEASRRVKTELLVQARGGCQIDGVHGGGGDKDKDSASADGEPPAP
RHVFVLAATNFPWDIDEALRRRLEKRVYIPLPGQAQRLQLLKINLKDVDVAPGVNLDSVA
AQLEGYSGDDITNICRDAAMNGMRRLVAGKTPAEIKALREAGKDSFKEPVTSEDFQQAIR
KINPSVSKEDIKRHEEWLNVFGST
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggccgccgaagttcaggcaatcaccattgctgtcacggcagggcgtgactgtgccatg
accggggactattccgcgagtgtgacttactatgaaaacgcagttgattcaacgacaagg
tacattcgtatgcttggtgacccacacgccatccgccagtggactgctctcctacaccaa
ctccaggaggagttcagcatcgtccggcagtgtgacaaggaagcccgcggaatgcgcatg
gaccctggcgtgtcccgttcaaacagttaccaggacatgggagacgcgcggggctcctca
tcgtatgacgacggttaccgtcaaccaattgttgtgtgccacaatccgggacagagccag
gacgaccccatggtttggcgcccgcccacgagagagggccgtggcggcggcgttgcgttc
cgtgcgccggcaggccgagcgcgcgctagtcaagacgacaaccgtcagatgccgtcatgg
gccaacaacggcggaggcggtcggggggggaacagtggcgggccatcgggcaggtcctcc
tcagcacaacggcgacccacagggagcgcaaacccgggcggcggcgccaaccaaggcagc
tacgacaagccctggcggcaaaacatggcgggcaagggtaacgccgccggtgcggcgggc
ggcaagggcggcggccccggtggtgcggcgcccggcaacaagaagcaatacataggaccc
gatcaggagctggctacgatgctcgaacgggatatcattgatcaggggatcaacatcaag
tgggacgacattgccgggctggaggaggctaagcgggtgctgaacgaggccctggtgctt
cccatgatcatgcccgactttttcacgggtattcgccggcctgtcaagggtgtgctgctc
ttcgggccccctgggaccggcaagactatgttggccaaagccgctgctacagaaacgtcg
tgcaccttcttcaacgtctcgtcggccacgttggcgtccaagtaccggggcgagagcgaa
cgcatggtgcgcgtgttgttcgacatggctcgcgagatggcgccgtccatgatcttcatt
gacgaggtggactcgctgtgctcgcagcgcggcacagcgaacgaacacgaggcctcgcgc
cgcgtcaagacggagctgctggtgcaggcacgtgggggctgccaaatcgacggcgtgcac
ggcggtggcggcgacaaggacaaggacagcgcctcggccgacggcgaaccgccagcgccg
cgccacgtgttcgtgctggctgccaccaacttcccgtgggacatcgatgaagcgttgcga
cgccgcctggagaagcgcgtgtatatcccattgcccgggcaggcacagcggctgcagctg
ctcaagatcaatctcaaggatgtggatgtggcgccgggcgtcaacctggattcggtggct
gcgcagctggagggctacagcggcgacgacatcaccaacatctgccgtgacgcggccatg
aacggcatgcggcggttggtggctggcaagacgcccgcagaaatcaaggcgcttcgggag
gctggcaaggacagctttaaagagccggtcacatccgaggacttccagcaggccattcgc
aagatcaacccctctgtatcgaaagaggacatcaagcgccacgaggagtggctcaatgtg
ttcggaagtacttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (26)   
   Pfam (26)   
All databases (58)   

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