KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_87780
Entry
VOLCADRAFT_87780  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K11099  small nuclear ribonucleoprotein G
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VOLCADRAFT_87780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcn03019]
    VOLCADRAFT_87780
   03041 Spliceosome [BR:vcn03041]
    VOLCADRAFT_87780
   03032 DNA replication proteins [BR:vcn03032]
    VOLCADRAFT_87780
Messenger RNA biogenesis [BR:vcn03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     VOLCADRAFT_87780
Spliceosome [BR:vcn03041]
 Complex A
  U1 snRNP components
   Sm proteins
    VOLCADRAFT_87780
  U2 snRNP components
    VOLCADRAFT_87780
 Complex B
  U1 snRNP components
    VOLCADRAFT_87780
  U4/U6.U5 tri-snRNP components
    VOLCADRAFT_87780
 Complex C
  U2 snRNP components
    VOLCADRAFT_87780
DNA replication proteins [BR:vcn03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     VOLCADRAFT_87780
SSDB
Motif
Pfam: LSM Gemin6 Hfq
Other DBs
NCBI-GeneID: 9620372
NCBI-ProteinID: XP_002947409
JGI: 87780
UniProt: D8TM80
Position
Unknown
AA seq 74 aa
MPKVAPPELKRFMDKKLSIHLNANRHVSGTLRGFDQFMNVVLDQTVDEKLKVDIGMVVIR
GNSIQTIEALEPIN
NT seq 225 nt   +upstreamnt  +downstreamnt
atgccaaaggttgcgcctccagagctgaagcgcttcatggacaagaagcttagcattcac
ttgaacgctaatcggcacgtatcagggacgctacgtggttttgaccagtttatgaatgtg
gtgcttgaccaaacagtggacgagaagctcaaggttgacatcggcatggtggttattcgc
gggaacagcatccagacgatagaggctctggagccaattaattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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