KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_97335
Entry
VOLCADRAFT_97335  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K06236  collagen type I alpha
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    VOLCADRAFT_97335
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:vcn00536]
    VOLCADRAFT_97335
Glycosaminoglycan binding proteins [BR:vcn00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   VOLCADRAFT_97335
SSDB
Other DBs
NCBI-GeneID: 9619435
NCBI-ProteinID: XP_002956408
JGI: 97335
UniProt: D8UCH4
Position
Unknown
AA seq 1122 aa
MAAVEEEVLSTEILRLREEYKALASQLPAALRCEKPESLIDYIGCIFNESDAAVAAGIIK
AGSGTVLNNTHDTAAAAAPDGSKTDSDACPTKPDSPTKHLTSEDLSKGLELLEHLREEVL
TSAETVTTASSELGWLGVITSALAGQPDAVALTRCPDCRRTVLACRMPYHRPHCVPAPAP
SVTAKPAAGAPKAPRGGASGSRGSAGAGSGAAAAAGGGGGRSGGGRGGGGRGSGRGPGRP
PGSGKPGGARHMRSLASLSRDLPSASAPWIAAMPDVSAAAAARHVPTKLKKVTFPGSPTA
AVADVAGDCGGLEGEAAVALEAGDDAFAAAASTQPSASDGDDEEEDAAAARGGIGAVGDT
AVNSNGGGNAVTAKAASTWAGAGLGGKSVASAPQTASGLLSRFLGGLTGAFVFPAATRRA
RSSCPNRIKNGVTSSGQPAAAAPAAGGTTQAAACSGAQGPQDRCGGERSSTGWGPAVQPG
CGAGNGAGPGLSSVATGGNGGVASAPAVGCAVGPKEGTGCGARASPAAKRGAQPQSLQQH
ATKRQQQRQASIAAATAIAAAAKSEDVAEGEDMEAAAEAACGGGEGGGGAAAATQQDATV
PSAASKASAPAPPASEPPSSLPQDISTAMEEPANGAFGTDPAAVAAAAAASQRPVGAAAA
SALPHPPSAPPGAGGDADVAGRSTAKYPQSGPPQGTSPVQHYQQQQQRLVGAAAGSQGSS
PGVLLAAGFANRKRPAVQELLRPGSRLRGQMLVTGPRPVGVGAGVPQQRPLPGVASGSGS
NGAAAVMRAQQPAQVSGQGPVLGSGQPMQRSGTGPLPSQTAGSGAMGGVAPPGQRLVGTQ
PPNSKAPGLMPLAAMGGAPGGTMSGALRQSSNGLMPPGMMPTPGSGPGMIPTPGAGPGGI
GPKQASGGGMIPTPGGGASLTPVPGTFMMIATPGPGSNAGPMKPPALMTAPGCAGLPAAA
ATAAAATPALAVPRAFVPGTLLTPAQVQATAQALLQEQHHLQIAAQLQKAQEQLQHAQQL
HQQAPHGSQAQHAQQLQQAQLQLQHAQQLFQAQVQMQLQQRIMAASQAQAQLQQQAQAQA
QAQAQTQQQQQGQPQAVQGHLPQQAQTQSTQQHYTPATQLQQ
NT seq 3369 nt   +upstreamnt  +downstreamnt
atggccgctgtagaggaagaagtcctatctaccgagattttgaggttacgggaagagtac
aaagcattggcttctcagctcccggctgcgctgcgctgtgaaaagcctgagagcttaatt
gattacatcggctgcatcttcaacgagtcagatgctgccgtggccgctgggatcataaaa
gctggaagcggcactgtgcttaacaacacccacgacacggcagcagctgcagctccggac
ggctccaagaccgattccgacgcttgccccacgaaacccgattcccccaccaagcacctc
acttccgaagacctctcgaagggactcgagttactcgagcacctgcgggaggaggttctg
acctccgcagaaacagttaccaccgccagcagcgagctcggatggctcggggtgatcacc
tcagcccttgcaggccagccagacgcagtcgctcttacacgctgcccagactgtcgccgt
acagtccttgcatgccgtatgccgtaccaccgaccgcactgcgtcccagcaccagcaccc
agcgtcaccgccaaacccgcagccggggcgcccaaagctcctcggggtggagccagcggt
tccaggggcagcgccggtgctggatcgggtgctgcggccgcagcgggcggcggcggaggg
aggtctggcggcggccgcggcggcggcggccgcggcagtggcaggggcccggggcggccg
ccgggttcaggcaagccaggtggggcgcggcatatgcggagtttggcgtcgctcagccgt
gatctccccagtgcctccgccccgtggattgccgcgatgcccgacgtgtcagcagcggcg
gcggcgcgccacgtgccgacgaagctgaagaaagtcacgttcccagggtcaccgacggcg
gcggttgccgacgttgctggcgactgcggcggtttagagggtgaggcagcggttgcgctg
gaagcgggggatgacgcgtttgcggcggcagcttccacacagccgtcagcgagcgacggc
gatgacgaggaggaggatgcagcagcggcaagagggggaatcggagctgtgggagacacg
gcggtaaacagcaatggaggaggcaatgcagtgacggcgaaggcggccagcacctgggct
ggggctgggcttgggggcaagtccgtagcgtctgccccgcagacagcttccgggttgctg
tcccgcttcctcggcggccttactggcgccttcgtgttccctgccgcgacgaggcgggct
cggtcgtcctgtccgaaccggataaagaacggggtaacgagttcgggtcagccggcggcg
gctgcgccagctgccggcggcacgacacaggcggcggcgtgcagcggggcgcaggggccc
caggatcgctgcggcggagaaaggagctcgacggggtggggccctgcagtgcagccggga
tgtggggcgggaaatggcgcaggtcctggcctctcttccgttgccacgggcggcaacgga
ggcgttgcctccgcgccggcggttggctgcgcggttgggcctaaggaaggaactgggtgc
ggcgcgcgggcaagtcccgccgctaagcgcggtgcacagccgcagtcgctgcaacagcac
gcaacgaaacggcagcagcagcggcaggcgagcattgcggcggcgacggcaattgcggca
gcggcgaaatcggaggacgtggcggaaggggaagatatggaggcagcggcggaggcggcg
tgcggcggaggagaaggaggaggaggcgcagcagcagcaacacagcaggacgccactgta
ccttcggcagcatcaaaagccagcgccccggccccgcccgcgtcggaacctccgtcctcc
ttgcctcaggacatctccacggctatggaggagcccgccaatggcgctttcgggaccgac
ccggcagcagtagcagcagcagcagcagcatcccaacgtcccgtcggggccgcggcggcc
tcagccctcccgcatcccccgtcagctccccctggcgcgggtggggatgcggatgtagca
gggagaagtaccgccaagtaccctcaatccggccctcctcaaggcacctccccggtgcag
cactaccagcagcagcagcagcggctggttggtgcagcagctgggtcgcaagggtcatcg
cccggtgtgctgctggcggcgggctttgcgaaccggaaacgaccagcggttcaggagctg
ctgcggcccgggtcccggctgcgaggccagatgctggtgactggacccagacctgtcggt
gttggcgccggggtaccacagcaaagaccccttcctggcgtcgccagtggcagcggcagc
aacggcgcggcggcagttatgcgagctcaacagccagcgcaggtgtcagggcaagggccg
gtgctggggtcgggccagcccatgcagcgcagcgggactggacccttgcccagccagacg
gctggatcgggggctatgggcggagttgcgccgccgggtcagcgtctggtcgggacccag
ccccctaattccaaggcccctggcctgatgcccctggcggctatggggggggcccccggc
gggaccatgagtggtgcgctgcggcagagctccaacgggctgatgcctccgggcatgatg
ccgacacctggctcggggccggggatgatacccacacctggagcgggacctggaggcata
gggcccaagcaggccagcggaggcggcatgattcccacacctggcggaggcgcctcactg
actcccgtgcctggcacgttcatgatgatcgcaacgccggggcccggatcgaatgccgga
cctatgaagccgcccgcgctcatgactgcgccgggatgtgcaggactgccggccgctgca
gctacggcggcggcggcgacgccagcgctggcggttccccgcgctttcgtgcctggcact
ctcctcactccggctcaggtccaggccacggcgcaggcgttgctacaggagcagcaccac
ttgcagattgcggcgcagctgcagaaggcacaggaacagctacagcatgcacagcagctg
caccagcaagcgccgcatggctcacaggcacagcacgcgcagcagctacagcaggcacaa
ctgcagctgcaacacgcacagcagctgttccaggcgcaggtacagatgcagctgcagcag
cggatcatggcggcgtcgcaggcacaggcccagctacagcagcaagcccaggctcaagct
caagctcaggcacagacgcagcagcagcagcagggccagccgcaagcagtgcaagggcat
ctgccgcaacaggcacagacgcaatcgacgcagcagcactatacgcctgctacacaactg
caacagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (75)   
   KEGG ORTHOLOGY (1)   
   RefGene (69)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
All databases (82)   

Download RDF
DBGET integrated database retrieval system