KEGG   Vibrio cholerae O1 O395: VC0395_A0392
Entry
VC0395_A0392      CDS       T00520                                 
Name
(GenBank) transglycosylase, Slt family
  KO
K18691  peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
Organism
vco  Vibrio cholerae O1 O395
Brite
KEGG Orthology (KO) [BR:vco00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vco01011]
    VC0395_A0392
Enzymes [BR:vco01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.29  peptidoglycan lytic transglycosylase
     VC0395_A0392
Peptidoglycan biosynthesis and degradation proteins [BR:vco01011]
 Peptidoglycan biosynthesis and degradation
  Lytic transglycosylase
   VC0395_A0392
SSDB
Motif
Pfam: SBP_bac_3 SLT Lysozyme_like
Other DBs
NCBI-ProteinID: ABQ20649
UniProt: A5F353
Position
2:complement(420687..422279)
AA seq 530 aa
MTPFAYKLPIRALWLGLLSLLLVGCQIDSEPKSELEKIRERGVLRVGTLNNPLSYYIGPD
GPTGLDYELAREFAKELGVKLEMKPAYRLSSLFPALKNGEVDIIAAGLSQSEERLKDFRA
GPAYYYVSQQVVYKKGDWRPRSFKQLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQ
KYPDFQFHVDSNSDVNDLLKKVSQGELLFTMADSVEVSLSQRIYPELAAAFELTEDQPIS
WFIRRSDDESLYALMIEFFGNLKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLPR
WTPLFQKYSAEFDWRLVAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPE
QSIRGGVEYLRRMMERVPDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWAD
VKDRLPQLQQKKYFTQTRYGYARGDEARNYVENIRRYYQSIIGHLEQRQLATGDESIEDL
TVIALDEEFFNEEANREILDEEAEALESESLENSESSAEPSAKPSTESKN
NT seq 1593 nt   +upstreamnt  +downstreamnt
atgactccttttgcctataaactccccattcgcgcactctggctaggcttattaagcctg
ctcttagtcggttgccaaatcgattccgagcccaaaagcgagctagaaaaaattcgtgaa
cgtggtgttttacgcgttggtacgctcaacaatcccctctcctactacatcggccctgat
ggcccaacgggattggattacgagttagcccgcgaatttgccaaagagcttggcgtaaag
ctggaaatgaagccagcataccgcctatctagcctgtttcctgccttaaaaaacggtgaa
gtggacatcattgccgcaggcttaagccaatccgaagagcgactcaaagattttcgcgca
ggtcctgcttattattacgtttcgcagcaagtggtctataaaaaaggtgactggcgacca
cgcagcttcaaacagttggtcgaacgccagcaaaccttattaaaggacaatcctgagctc
gcctttttcagcgtggtggatgactcccattttgagcacaccttgctagccaaacagcag
aaataccccgattttcaatttcatgtcgacagcaattccgatgtgaatgacttactgaaa
aaagtctcacaaggagagttactgtttacgatggccgactctgttgaggtgtcgctttct
caacgcatctatcctgaactggcggcggcatttgaattaaccgaagatcagccgatctca
tggtttatccgccgttccgacgatgaaagtctgtatgccttaatgattgaattctttggc
aatctcaagcaatcgggctatttggcgtctttggaagaaaaatacatcggccatattggt
gcctttgattatgtcgatacccgcgcctttattcgcgcgctggatacacgattacctcga
tggacgcctctctttcaaaagtactcggcagagtttgattggcgtttagtcgccgcactt
gcgtatcaggagtcgcactggaatccgtatgccaaatcgcccacgggtgtccgtggtttg
atgatgttgacactaccaaccgcgcgcagtgtaggggtaagcgatcgcctcgatccagaa
cagtcgattcgtggtggggtggaatacttgcgacgtatgatggagcgtgtccctgactcg
atttccgaacatgaaaaaatttggtttgccttagcctcttacaacattggctacgggcat
atgatggatgcgcgacgcttaaccaaaagccaaggcgcagatcctgactcatgggcggat
gtcaaagatcgcctaccacagctacagcagaaaaaatatttcacccagacccgctatggc
tatgcgcgtggcgacgaagcacgtaattatgtggaaaatattcgccgttactatcaaagc
atcatcggccatcttgagcagcgtcaattggcgacaggcgatgaaagtattgaagatctc
accgtgattgcgcttgatgaagaatttttcaatgaagaagcaaaccgtgaaatcttggat
gaagaagcggaagcactcgaatcagagtcactcgaaaacagtgaatcgagcgccgagcca
tctgccaaaccatccactgagagcaaaaattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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