KEGG T00520: VC0395

Vibrio cholerae O395: VC0395_A0519

Entry

VC0395_A0519 CDS T00520

Definition

hypothetical protein

Orthology

K08086

pilus assembly protein FimV

Organism

vco Vibrio cholerae O395

Class

SSDB

Motif

Pfam:

LysM

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

2:555714..560579

AA seq 1621 aa
MDPIYLTNLRTSKFKAHTEPFMRRFFQRLLLPVAVMVVTQTSFVSAESIRLVGPDGQVQP
TPQYSENIVRNSANNEPGRFFGPTSANQTLWSIASQLRPSSSVTVQQTLLAIYQLNPQAF
ENQNIHTLIPGSTLRVPSLAQISRNSTQDAVNIMASHQAKLNQTPDTPVRPVAPPRPAPV
ATPKVEAVAQTPPQVTPTTAPQEKAPTELKTPAKPSQSTDAEVMALEEKNHTLRLMLSQV
QSEVSTLKEELGDENRIRSEVERLLEEERRKAEEASRLAPSALDNLLSNGWLVALLALIP
GLLIAIVVLLLLNRRSSAQQENPTQNNITSEMPTAAPVTLGPEQTEDIGDDLLLDDDLFS
TTDDKEENDAEKAFSDEDDVFADLNETDLDFNLDGQDSDDLFVGIDDDGDLDTEFDALNE
SANGISVNADDKALGLEEMERALNDVSEPTDNDDLNSFDLADENQMSEDDIEALLSGDEE
NELLSDGKVDQSLLDDLLASELDALDDEPAIQDTETLDTLLNDELASLSEEDDDEFDLSG
AGVAGDQDLDDLFASIEEQADLEQLEAKAIDETALLDEILAEQDAPLSEESTELLDELLD
DFDKPENDEFDAQTADLLQPEEPILDLEEDSTQLLNEVLGEPVPEELASGLEIDQNSTEL
LDELLDDLDLDDESIEATEFSVAPEKLSVEDGTELFDELLEIEQHPESAESLPELATEDE
FNSDTFIDDLLNSAPAKDPLLEPVLDENEAFAQADDFDFNPEIEGGLEDDLSQPSALPAN
EFGTPQDEDWVFDEDDSSPTLEGNAELELSSAEDDLPEQTTATNETADELLADLAAQPQS
NTVDTSDDALAPDGLSQSVEEPLTLNDLELPEENDEPQLAEVTPSSAFDEQQVETEIEPE
SEPLAAEASNDESDLTALNELDLPEYTEEDVLADVQLEPAAESEVEPDLELVNEPVTEEA
FTELDELDLPEYTEEDALADAQLEPVAESEVEPELDLASEPAEEEAFTELNKLDLPEYTE
EDALADAQLESATESEVESELELVSEPAAEEAFTELDELDLPEYTEEDALADSQLEPAAE
SEVEPELELVSEPVTEEAFTELDELDLPEYTEEDALADAQLEPAVESEVEPELELASEPA
EEEASTELNELDLPEYTEEDALADAQLEPAAESEVESELELASDLEEEEPFTELNELDLP
EYTEEDALADAQLEPAVESEVEPELELATEPAEEEAFPELDELDLPEYTEEDALADAQLE
PAAEAEVEPELELASDLEEKETFTELDELDLPEYTEEDALADAQLEPAAESEVEPELELA
SVLEEEDSFTELDELDLPEYTEKDALADAQLEPAAESEVEPELGDETETLAQETESDALV
ADEDLLASVESAVDEVQPELLGATQDVPPTQSLANKAFDEEALHDWLSDNPDGEKPFSFD
RPLDAKTIDSAGMDIDAMLQMGGEDWNGFHLTPDQQAQLPDDVPEDEQAIWASETPEPQA
KPENWGSQEDLLDFDPQRDGYMTIDELMAQVESEEQGLNPDEEELKLDVGLDEFPDVIGD
IRDIDVDSGAEAAGKLDLAKIYIEMNDEKGAIKLLEEAIVDGDDEIRQQAKRLIDVLNGR
V

NT seq 4866 nt +upstreamnt +downstreamnt
gtggatccgatatatttaaccaatctccgtacttcaaaattcaaagcacatactgagcct
tttatgcgtcgatttttccaacggctcctgctgccagtggcagtaatggtcgtgactcag
acttctttcgtcagtgcagaaagcattcgtcttgttggccctgatggccaagtacaacct
acgccccaatatagtgaaaatattgttcgcaattcggctaataatgaacccggtcgattt
ttcgggccgacctcagccaaccagactttgtggtcgatagccagccagttacggccttct
tccagcgtcacggtgcaacaaacgttattggccatttatcagctcaatcctcaggcgttt
gaaaatcagaatattcacactctgatcccaggtagtactctacgtgttccgtcactggca
caaatcagtcgcaatagtactcaagacgctgtcaacatcatggcgtctcaccaagcaaaa
ttaaaccaaacacccgatacgccagtgaggcctgtagctcctccacgtcctgctcctgtt
gcaacgccaaaagtagaagcggtcgcgcaaacgccacctcaagtcacccctacgaccgcg
ccgcaagagaaagcgcctactgagctcaagacgcccgctaaacccagccaatcaacagat
gctgaagtgatggctctggaagagaagaatcacaccttgcgcttgatgctttcgcaagtg
caatcggaagtcagtactctcaaagaagagctgggtgatgagaaccgcatccgcagtgaa
gtcgagagattgttggaagaagagcgccgtaaagcggaagaagcttcgcgtcttgcgcca
tcagctttagataatttgctttctaatggctggttagtggcattgttagcgctaatcccc
ggtctgcttattgctatcgtggtgcttctgctgcttaaccgccgctcaagtgctcagcaa
gagaatccaacgcaaaacaatatcacttctgaaatgccaaccgcggcgcctgtcacttta
ggtccagaacagacggaagatattggtgatgacctgctgttggatgatgacctcttcagt
accaccgacgacaaagaagaaaatgacgctgaaaaagcgttctcggatgaagatgatgtc
ttcgccgatctgaacgaaaccgatcttgatttcaatcttgatggacaggacagcgatgat
ctgtttgtaggaattgatgatgatggcgatctcgataccgaatttgatgctctaaatgaa
agtgccaacggcatttctgttaacgctgatgataaagcgctcggacttgaggagatggag
cgcgcgctaaatgatgttagtgaaccaaccgacaacgatgatctgaattcttttgacttg
gctgatgaaaatcaaatgtcggaggatgacatcgaagcgctgttatccggtgatgaagag
aatgagctgcttagcgatggcaaagtggatcaatcgctgctggatgacttactcgccagt
gaactcgacgcattagatgatgaacccgcgatccaagataccgaaaccttggatacgcta
ctcaatgatgagctggcgtcgctcagtgaagaggatgatgacgaatttgatctcagtggt
gcaggcgtagcgggtgaccaagatttggatgacctgtttgcctctatcgaagagcaagct
gaccttgagcaacttgaagccaaagcgatagatgaaacggcattacttgatgaaatactc
gctgaacaagatgctcctctgagcgaagagagtaccgagcttttagatgagttgttggat
gattttgataagccagaaaacgatgagtttgatgcccaaactgcggatcttcttcaaccc
gaagagcccattttagatttagaggaagatagcactcagttactcaatgaggtgttgggg
gaacccgtgcccgaagagcttgcctctgggcttgaaattgaccaaaacagcactgagctt
ttggatgaattactggatgatctggacttggatgatgaatccatcgaagctacagaattc
tcagtggcaccggaaaaactcagtgtagaagatggtactgagctttttgatgagttgctt
gaaattgagcagcatccagagtcagcagaatcactcccggagttggcaaccgaagatgag
tttaatagcgataccttcattgacgacttactcaactcggcacccgcaaaagatccgtta
cttgaacctgtactcgatgaaaatgaagctttcgcacaagcggatgattttgatttcaat
cctgaaattgaaggtggtctggaagacgatttatcgcagccaagtgcgctacccgccaat
gagtttggtactcctcaagatgaggattgggtatttgatgaggatgactcctcaccaact
ttagagggtaatgctgagcttgagctatcttcggctgaggatgatttgccagagcagact
accgccacaaatgaaacggcggatgaattactggcagatttggctgcgcagccgcaatca
aatacagtggatacgtctgatgatgcgttagcccctgacgggctttctcagtctgtcgag
gagcctctcactcttaacgatttggagctgccagaagagaatgatgagcctcaattggct
gaagtcactccgtcttctgcattcgacgaacaacaagttgagaccgaaattgagcctgag
tcggagccgttggctgcagaagcatctaatgatgaaagtgaccttactgcgcttaatgaa
ctcgatttacccgagtacaccgaagaagatgtcttggcagatgtgcagttagagcccgcc
gcagaatcggaagttgagccagatcttgagttagtaaatgagccagtcacggaggaagcc
tttaccgagcttgatgagctcgatttgcctgagtacaccgaagaagatgccttggcggat
gcgcagttagagcctgtcgcagaatcggaagttgaacccgagcttgatctggcaagtgag
ccagccgaggaagaagcctttaccgagcttaataagctcgatttacctgagtacaccgaa
gaagatgccttggcggatgcacagttagagtccgccacagaatcggaagttgagtcagag
cttgagttagtaagtgagccagctgcggaagaagcctttaccgagcttgatgagctcgat
ttacctgagtatacagaagaagacgccttggcggattcgcagttagagcccgccgccgaa
tcggaagttgagccagagcttgagttagtaagtgagccagtcacggaggaagcctttacc
gagcttgatgaactcgatttgcctgagtacaccgaagaagatgccttggcggatgcgcag
ttagagcctgccgtagaatcggaagttgagccagagcttgagctagcaagtgagcctgct
gaggaagaagcctctaccgagcttaatgagcttgatttgcccgagtacaccgaagaagat
gccttggcggatgcgcagttagagcctgccgcagaatcggaagttgagtccgagcttgag
ctggcaagcgatctcgaagaggaagaaccctttaccgagcttaatgagctcgatttgcct
gagtacaccgaagaagacgctttggcagatgcacagttagagcctgccgtcgaatctgaa
gttgagccagagcttgagctggcaactgagccagccgaggaagaagccttccccgagctt
gatgagctcgatttgcctgagtacaccgaagaagacgctttggcggatgcgcagttagag
cctgccgccgaagcggaagttgagccagagcttgagctggcaagcgatctcgaagagaaa
gaaacctttactgagcttgatgagctcgatttgcctgagtacaccgaagaagacgccttg
gcggatgcgcagttagagcctgccgccgaatcagaagttgagccggagcttgagttggca
agcgttctcgaagaggaagactcctttactgagcttgatgagctcgatttgcctgagtac
actgaaaaagacgccttggcggatgcacagttagagcctgccgctgaatcggaagttgag
ccagagctcggtgatgagacagaaacgctagcacaagagacagaaagtgatgcgctggtt
gccgatgaggatttactggccagtgttgaaagcgcagtagacgaggttcagcctgaactt
ttgggcgcgactcaagatgtgccaccgacacaatctttggctaacaaggcatttgatgaa
gaagcgctgcacgattggctgagtgataatcccgatggtgaaaaaccgtttagctttgat
cgtccacttgatgctaaaacgattgatagcgcgggcatggatattgatgccatgttgcaa
atgggcggcgaagattggaatggtttccacctaaccccagatcagcaagcgcagttgccg
gatgatgtacctgaggatgagcaagcgatttgggcgagtgaaacaccggagccgcaagcg
aagcctgaaaactggggatcgcaagaggatttgctggatttcgacccacagcgtgatggc
tacatgaccatcgacgagctcatggcacaggtagaatcggaagagcaaggcttaaatcct
gatgaagaggagcttaagcttgatgtgggtctggatgagtttcctgatgtgattggtgat
attcgagatattgatgtggatagtggtgcggaagcagctggtaagctggatttggccaaa
atctacattgaaatgaacgatgagaaaggggcgattaaactgctcgaagaggcgattgtt
gacggcgatgatgagattcgccaacaagctaaacggctgatcgatgtgctgaatgggcga
gtgtag

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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