KEGG T00520: VC0395

Vibrio cholerae O395: VC0395_A1295

Entry

VC0395_A1295 CDS T00520

Definition

alpha-1,6-galactosidase

Orthology

K07407

alpha-galactosidase [EC:3.2.1.22]

Organism

vco Vibrio cholerae O395

Pathway

vco00052	Galactose metabolism
vco00561	Glycerolipid metabolism
vco00600	Sphingolipid metabolism

Brite

KEGG Orthology (KO) [BR:vco00001]
Metabolism
  Carbohydrate metabolism
   00052 Galactose metabolism
    VC0395_A1295
  Lipid metabolism
   00561 Glycerolipid metabolism
    VC0395_A1295
   00600 Sphingolipid metabolism
    VC0395_A1295
Enzymes [BR:vco01000]
3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.22  alpha-galactosidase
     VC0395_A1295

SSDB

Motif

Pfam:

Melibiase Glyco_hydro_31 Raffinose_syn GHL6 DUF187

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

2:complement(1375904..1377640)

AA seq 578 aa
MSHLRLANGREILVQQADIELEIAGNELFARYIGLHNRPFERRYPLFSTLLDVESDARLV
GDGFQMLSQASGTLSHIQEVGRCPDNNLSYRIYPHDAPKRFYNTLMIEAAGRYLLFGFTS
CQRFAGFFEVLRHPQHWVLSAFIDGEETRPQDWITNQLESVICLEGESMSELYQAYAEAI
SRHHPPRPHLKDPAPMGWCSWYAYYAEVTEQDIKENVAILAERHPELEWVLLDDGYQAFM
GDWLTPSQKFPSGIQQVVADIRAQGKKPAIWLAPFIAEADSAVFRQHPDWFVKNAAGQPL
KAEEITYGGWRCTPWYVLDGSHPDVQEHLTQVVKTLREEWGVELFKLDANYWGTLQGQRF
QSGVTGVEAYRMGMQAIAEGAGDGWLLGCNAPMWPSLGLVDAMRVSDDVERNADRFCQIA
RETLMRSWQHRQLWQIDPDCLTLTSLPNQSADRASYEFHRNLLLASGGLLLSGDPLPKLT
PFAKQSLKRLLKRFQYSQKAAKITSLSMRHAFLPLTDKNDLHCLFNFNGKAQEFTLVANH
PVQWYDYWTGEQLSSEPSKLLIVNLEKGLQSRAIFTVG

NT seq 1737 nt +upstreamnt +downstreamnt
atgagccatctcagattagcgaatgggcgagaaatcctagtgcagcaagcggatattgag
ctggagatcgcaggcaatgagctttttgctcggtatatcgggttacacaatcgacctttt
gagcgccgttatccactgtttagcactttactggatgtcgaatcggatgcccgcttagtg
ggggatggctttcaaatgctgtcgcaagcctcaggtacgctaagccatatccaagaagtt
ggacgatgtccagataacaatctcagttaccgcatctacccgcatgatgcgccaaagcgt
ttttacaataccttgatgatagaggccgctggccgctatctgttgtttggctttacttct
tgccagcgttttgcgggcttttttgaagtgctccgtcacccgcagcattgggtgttaagc
gcgtttattgatggagaggaaacccgcccacaagactggatcaccaatcaattggaatcg
gtgatttgcttagaaggcgaatccatgtcagagctttaccaagcctatgccgaggcgatc
tctcgccaccatccgccaagaccccatctcaaagatcccgcaccaatgggctggtgttct
tggtacgcctattatgcagaggtgaccgaacaagatatcaaagagaatgtcgcgatattg
gcggagcgtcacccagaattggaatgggtgctgctggatgacggctatcaagcgtttatg
ggcgattggctcacaccatcccaaaaatttcccagtggtattcagcaagtggttgccgat
attcgagcccaaggtaaaaagcccgccatttggctcgcgccttttatcgcggaagcggat
tcagcggtctttcgtcagcatccggactggtttgtgaaaaatgccgcaggtcagccactc
aaagccgaagagatcacttatggcggttggcgctgtacgccttggtatgtgttggatggt
tctcatccggatgtgcaagagcacttgacccaagtggtgaaaaccctgcgtgaagagtgg
ggcgttgaactgtttaagctggatgccaactactggggaacgctacaaggccagcgtttt
caatcgggtgttacgggtgtagaagcgtatcgaatgggcatgcaagccatcgcggaaggc
gcaggcgatgggtggctactcggttgtaatgcgccgatgtggccttcactgggtttggtg
gatgcaatgcgtgtgtcggatgatgtagagcgcaatgccgatcgcttttgccaaattgcg
cgtgaaaccttaatgcgcagttggcagcaccggcaactgtggcaaatcgatccggattgc
ttaacgctcacctcgctgcccaatcaaagtgccgatcgcgccagctacgaattccaccgt
aatttgctgcttgccagtggtggtttgctattgtcaggcgacccactgccgaaattaaca
ccgtttgcaaaacagagcctgaaacgtttactcaaacgattccaatacagtcagaaggcg
gccaaaatcacttccttgagtatgcgccatgccttcttaccgctgaccgataaaaatgat
ctgcactgcttgtttaacttcaacggtaaagctcaggagtttaccttggtcgccaatcat
ccggtgcaatggtatgactattggacaggagagcaattaagcagcgaaccttccaaactg
ctcatcgttaacttagagaaggggttacaaagccgcgccatttttacagtgggttaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (20)   
   KEGG COMPOUND (20)   
Chemical reaction (13)   
   KEGG ENZYME (1)   
   KEGG REACTION (12)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (51)   

Download RDF

DBGET integrated database retrieval system