KEGG   Vibrio cholerae O1 O395: VC0395_A2758
Entry
VC0395_A2758      CDS       T00520                                 
Name
(GenBank) putative host factor-I
  KO
K03666  host factor-I protein
Organism
vco  Vibrio cholerae O1 O395
Pathway
vco02024  Quorum sensing
vco03018  RNA degradation
vco05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VC0395_A2758
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VC0395_A2758
   05111 Biofilm formation - Vibrio cholerae
    VC0395_A2758
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vco03019]
    VC0395_A2758
   03036 Chromosome and associated proteins [BR:vco03036]
    VC0395_A2758
Messenger RNA biogenesis [BR:vco03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     VC0395_A2758
Chromosome and associated proteins [BR:vco03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    VC0395_A2758
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: ABQ20544
UniProt: A5F3L7
Position
2:2912235..2912498
AA seq 87 aa
MAKGQSLQDPFLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVNQMVYKHAIS
TVVPARPVSHHSGDRPASDRPAEKSEE
NT seq 264 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctctacaagacccatttctgaatgcactacgtcgtgaacgtatc
cctgtttctatctaccttgtgaacggcattaaactgcaaggtcagatcgaatcatttgat
caatttgtgatcttgctgaagaacacagtaaaccaaatggtttacaagcatgcgatttct
actgtggttcctgctcgtccagttagccaccacagcggcgaccgcccagcatcggatcgt
ccagcagagaagtctgaagagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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