KEGG T03389: EN18

Vibrio cholerae O1 2012EL-2176: EN18_02930

Entry

EN18_02930        CDS       T03389

Symbol

rumB

Name

(GenBank) 23S rRNA methyltransferase

K03212

23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]

Organism

vcq Vibrio cholerae O1 2012EL-2176

Brite

KEGG Orthology (KO) [BR:vcq00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vcq03009]
    EN18_02930 (rumB)
Enzymes [BR:vcq01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.189  23S rRNA (uracil747-C5)-methyltransferase
     EN18_02930 (rumB)
Ribosome biogenesis [BR:vcq03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    EN18_02930 (rumB)

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_31 MTS Methyltransf_15 Methyltransf_25 Cons_hypoth95 Methyltransf_4 Methyltransf_32 Met_10 Methyltransf_12 TehB Methyltransf_11

Other DBs

NCBI-ProteinID:

AIT31764

UniProt:

A0A0H5X543

Position

2:complement(583821..584948)

AA seq 375 aa
MQCEFFIQKRCTSCHLCAQPYSEQVTNKDQQLRELIAPATDVQWLPPVTSADTAFRNKAK
MVVLGAAHAPILGIEDAQGQPLSLVTCPLYPQPMQELLAYLENWIRIAGIPPYNKLKKKG
ELKFILLTRSENSGQFMLRFVARSHAVLERIERNLPTLIAAFPMIEVISVNIQPVHMARL
EGEEEIFLTETQSLLEHFNDVPMVIRPKSFFQTNPKVAEQLYATARTWVREIAPTQMWDL
FCGVGGFALHCAAPDTAVTGIEIEPEAIASAQRSAQMMGIDNLSFAALDSAKFSQSQMSA
PELVLVNPPRRGLGSELTAQLEALAPKYILYSSCNPQTMVKDIAELSSYQMIRVQWFDMF
PHTDHAEVLTLLVRK

NT seq 1128 nt +upstreamnt +downstreamnt
atgcagtgtgagttctttattcaaaaacggtgtacctcttgccacctatgtgcgcagccg
tattccgagcaggttacgaataaagatcagcagttgcgcgagttgattgcgccagccacg
gatgtgcagtggttaccccctgtcaccagtgctgacaccgcgtttcgcaataaagccaaa
atggtggtgcttggtgcggctcacgcgccgattttaggcattgaagatgcgcaaggtcag
cctttgtcgctagtgacttgcccgctttatccgcagccgatgcaagagctgctcgcttat
ctggaaaactggatccgcattgcgggtattccaccctataacaagctgaagaaaaaaggt
gagctgaagtttattctgctcacccgcagtgaaaacagcggccaatttatgctgcgtttt
gtggcgcgcagccatgcggtgcttgagcgaattgaacgcaatttgccaacattgatcgca
gctttcccgatgatcgaagtcatttccgtcaatatccagccggtgcatatggcgcgttta
gaaggcgaagaggaaattttcctcaccgaaacccaaagcctgcttgaacacttcaacgat
gtgcctatggtgatccgcccgaaaagctttttccaaaccaaccccaaagtggctgagcag
ctatacgcgaccgcacgtacttgggtgcgcgagattgcgccaacgcaaatgtgggatctg
ttttgtggcgtcggtggctttgcgctgcattgcgccgcgccagacactgctgtgacgggc
attgaaattgaaccagaagcgattgccagcgcgcaacgttcggcgcaaatgatggggatt
gataatctcagctttgcagcgctcgattctgccaagttttcacaaagccagatgagtgcg
ccagagttagtgttggtcaaccctccacgtcgtggtttgggcagcgaactgaccgcgcaa
ttggaagcgctcgcaccaaaatacattctttattccagctgtaacccgcaaactatggtt
aaagacatcgctgagctttccagttaccaaatgattcgcgtgcagtggtttgatatgttc
ccgcatacagatcacgctgaagtgctgaccttgttggtcagaaaatag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (21)   

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