KEGG   Vibrio cholerae O1 2012EL-2176: EN18_15120
Entry
EN18_15120        CDS       T03389                                 
Name
(GenBank) ssDNA exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
vcq  Vibrio cholerae O1 2012EL-2176
Pathway
vcq03410  Base excision repair
vcq03430  Mismatch repair
vcq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vcq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    EN18_15120
   03430 Mismatch repair
    EN18_15120
   03440 Homologous recombination
    EN18_15120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcq03400]
    EN18_15120
DNA repair and recombination proteins [BR:vcq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     EN18_15120
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     EN18_15120
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      EN18_15120
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB
Other DBs
NCBI-ProteinID: AIT30355
Position
1:complement(2061362..2062999)
AA seq 545 aa
MAQLEKAAKALHSFKQLHGIDRAVELLFAAIAEQKRIIVVGDFDADGATSSALSVLALRM
LGSRNVDYLVPNRFEDGYGLSPEVVDQAIERGAEMIMTVDNGVSSLEGVRYAKQKGLQVV
VTDHHLPGQELPEVDAMVNPNLQQCAFPSKALAGVGVAFYLMMALCVHMRQQGWFAAQGM
VEPKLMELIDLVALGTVADVVPLDDNNRILVHQGLQRIRAGLARPGIQALIEVAKRDARR
LVAADFGFALGPRINAAGRLDDMSFGVELLLCNNIHAARRMASELDGLNQTRKEIEEGMK
QEAVAFCERLQLSDDRELPYGLVLFQRDWHQGVIGILASRIKEKYHRPVIAFAEGGDGKL
KGSCRSVPGLHMRDALDKIDTQNPGIILKFGGHAMAAGLTIEEQNFERFCRLFDQLVREE
LDEAALKGIILSDGELKPEEFSLHTAELLRAGGPWGQAFPEPLFDGEFKVLHQKLVGEKH
LKLMLEPLYKGFPTNVMIDGIAFNVDLRRWPDASVKTVRLAYKLDINEFRGNQSLQLMID
HLEAK
NT seq 1638 nt   +upstreamnt  +downstreamnt
gtggcacaacttgaaaaagccgccaaagcgctgcactcattcaagcagttacatggtatt
gatcgtgcggttgagttgctgttcgcagcgattgctgagcaaaaacgcatcatagtcgtc
ggtgattttgatgccgatggcgcaaccagttcggcactttccgtgctcgcgctgcgtatg
ctcggtagtcgtaatgtcgattacttagtgccaaaccgttttgaagatggttatggtctg
agccctgaagtggttgatcaagcgattgagcgtggcgcagagatgatcatgaccgtggat
aacggcgtttcatcactggaaggggtgcgttacgccaaacagaaagggctgcaagtggtg
gtcaccgatcatcacttaccgggacaagaactccctgaagtcgatgccatggtaaacccg
aacttgcagcagtgtgcttttccttctaaggcgctggctggggtgggggttgctttctat
ttgatgatggcactttgtgtgcacatgcgtcagcaaggttggtttgccgcgcaaggcatg
gttgaaccgaaattgatggaactgatcgatttagtggcactcggtacggtcgccgatgtg
gtgccactggatgacaacaatcgtattttggtgcaccaaggtttgcagcgtattcgtgcg
ggtttagcgcgccccggtattcaagctctgattgaagtcgccaaacgggatgcgcgccgt
ttggtcgctgctgattttggctttgcgcttggaccacggattaacgccgcagggcgtttg
gatgatatgtcgttcggcgttgaacttttgctgtgtaacaacattcacgctgcgcggcgt
atggcgagtgagctggacggcctcaatcaaacccgaaaagagattgaagaggggatgaag
caagaggcggtcgcgttttgtgagcgtttgcaactgagcgatgatcgcgagctgccttac
ggtttagtgctgtttcagcgcgattggcaccaaggggtgatcggcattcttgcttcgcgc
atcaaagagaaataccaccgacccgtgattgcgtttgctgaaggtggtgatggcaagcta
aaaggttcatgtcgctcggttcccggtctgcatatgcgtgatgcactagataaaattgat
acgcaaaacccgggcatcatactcaaatttggtggtcacgcgatggcggctggattaacc
attgaagagcaaaattttgaacgtttttgccgactgtttgaccagctagtgcgtgaagag
ctggatgaagcagcactcaaaggcatcatcctcagcgatggcgaactgaaaccggaagag
ttttcgctgcataccgccgaattactgcgtgctggtggcccgtgggggcaagcgtttcct
gaacccctgtttgatggcgaatttaaagtgctgcaccaaaaactggtcggcgaaaaacac
ctcaaactgatgcttgagccgctatataaaggctttccaaccaatgtgatgatcgacgga
attgcgtttaatgtcgacctacgtcgctggccggatgcctcagtcaaaacggtacgtttg
gcgtacaaactcgacatcaacgagtttcgcggtaatcaatcattgcaactcatgattgat
catctggaagcgaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system