KEGG   Vibrio cholerae O395: VC395_1061Help
Entry
VC395_1061        CDS       T02099                                 

Gene name
yfcX
Definition
fatty oxidation complex, alpha subunit
Orthology
K01782  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
Organism
vcr  Vibrio cholerae O395
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Class
Metabolism; Overview; Carbon metabolism [PATH:vcr01200]
Metabolism; Overview; Fatty acid metabolism [PATH:vcr01212]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:vcr00640]
Metabolism; Carbohydrate metabolism; Butanoate metabolism [PATH:vcr00650]
Metabolism; Lipid metabolism; Fatty acid degradation [PATH:vcr00071]
Metabolism; Lipid metabolism; Biosynthesis of unsaturated fatty acids [PATH:vcr01040]
Metabolism; Amino acid metabolism; Valine, leucine and isoleucine degradation [PATH:vcr00280]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:vcr00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:vcr00380]
Metabolism; Metabolism of other amino acids; beta-Alanine metabolism [PATH:vcr00410]
Metabolism; Metabolism of terpenoids and polyketides; Limonene and pinene degradation [PATH:vcr00903]
Metabolism; Metabolism of terpenoids and polyketides; Geraniol degradation [PATH:vcr00281]
Metabolism; Xenobiotics biodegradation and metabolism; Caprolactam degradation [PATH:vcr00930]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
I:1138298..1140472
Genome map
AA seq 724 aa AA seqDB search
MCCGWLRRCYDSGGGIMDNNNAFQLSFDEQHYAWLAIDVPGEKMNTLQAAFAEEMQAVFA
TLNEKRGQIKGLIIHSLKPDNFIAGADVRMLEACQSVHEAQALASQGQQMFQQLADLPFP
VVAAIHGPCLGGGLELALACDYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLP
ALDLILTGKQLRAKKAKKLGVVDACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLA
NTGLGRKLIFDQAAKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMT
RESKALRSIFFATTEMKKDLGADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRIKD
VANDGVLNALNYNYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFED
LKLKQQMVADIEANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEV
IPHATTSDETIATVVTLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEKL
DAALLDFGFPVGPITLLDEVGVDIGAKIMPILVKELGPRFQGPDVFDVLLKDNRKGRKSG
KGFYTYKGSKKKEVDKSVYKLLKLTPESKLNDKEIAMRCLLPMLNEAVRCLDEGIIRSAR
DGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFAPCDGLLTRAGLGE
KFYP
NT seq 2175 nt NT seq  +upstreamnt  +downstreamnt
ttgtgctgcgggtggcttaggcgctgctatgattctggaggtggaataatggataacaac
aatgcatttcagctctcgtttgatgagcagcattacgcttggctggcgattgatgtcccg
ggcgaaaaaatgaataccctgcaagcggcatttgcagaagagatgcaagccgtttttgca
acgctcaatgaaaaacgaggacagatcaaagggctgattatccactctcttaagccggat
aactttattgcgggtgcggatgtccgcatgttggaagcttgccaatcggtacatgaagca
caagcgttagcctcgcaggggcaacagatgttccagcagcttgccgatttgcctttccct
gtggtcgcggcgattcacggcccttgcttaggcggtggtttagaattggctctggcgtgt
gattatcgtgtctgtactgaagatgaggtaacacgtctaggcttaccagaagtgatgttg
ggtttgcttccgggctctggcggtacgcagcgtttaccacgtttgattggtttactgcct
gcgctggacctcatcttaacgggcaaacaattgcgtgccaaaaaggccaagaaattgggt
gtggttgatgcatgtgttccgcactcagtactgttggatgtggccaaacgtcttctagaa
gaaaaagggcacaaaaagcgcgctcaagttacgctaccgatcaaagaaaaactgctcgcc
aataccggcttggggcgtaagttgatttttgaccaagcggccaagaaaacgcagcagaaa
acgcgtggtaactaccccgcagcgcaagccattttagaggtcattcagtatggcctagaa
aaagggatgcatgctggcttggaatatgaagccaagcgtttcgctgaattggtgatgacc
cgagaatcgaaagcactgcgctccattttctttgcgaccacagagatgaaaaaagatctc
ggtgcggatgccaaacccgcacctgtggcggctgtgggcgtgctcggtggtggtttgatg
ggggctggcatcagtcacgttactgtggcgaaagccaaaacatcggtgcgcatcaaagat
gtggcgaatgatggtgtgctcaatgccctcaattacaactacaagctgtttgataagcag
agacagcgcaagattttgactaaagcacagctgcaagcgcagatgtcgcagctctcgggt
gggactggctttgtgggttttgatcgctgtgatgtagtgatagaggctgtgtttgaagac
ctgaaacttaagcaacaaatggtggcggatattgaagcgaatgccaaaccgacaacgatt
tttgcgaccaacacatcctcgctgccgatccatcagatcgcgagccaagcgcagcgtccg
caaaatattgtgggtttacattatttcagcccagttgaaaaaatgccgttggtggaagtg
attcctcacgcgaccacctcggatgaaaccattgcgaccgtggtgacattggcacgtaag
cagggcaaaacaccgattgttgttaaagactgtgctggtttttatgtcaaccgcatttta
gcgccttatatgaatgaagccgcgcaagtgctgatggcgggtgaacctatcgaaaaactc
gatgctgcgttactggattttggtttcccagtggggcctatcaccttgcttgatgaagta
ggggtcgatatcggagccaagatcatgccgattttggttaaagagcttgggccgcgtttc
caaggaccggacgtctttgatgtgcttttgaaagataaccgtaaaggccggaaaagcggt
aaaggtttctacacctacaaaggcagcaagaagaaagaagtcgataaatccgtttataaa
ctgctgaagttaaccccggaatctaagctaaacgacaaagaaatcgcgatgcgttgcttg
ttgcctatgctcaatgaggcggttcgttgtctcgatgaaggcattattcgcagtgcacgt
gatggcgatatgggcgcgatttttggcatcggtttcccgccgttcttaggtgggcctttc
cgttacatggacacgcttggtttaaccaaagtggtggaaatgatgaaccaacacaccgag
aaatatggagagcggtttgctccatgtgacggtttgttgacgagagcgggattgggcgag
aagttctacccctag

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