KEGG T02099: VC395

Vibrio cholerae O1 O395: VC395_1298

Entry

VC395_1298        CDS       T02099

Name

(GenBank) pseudouridine synthase family 1 protein

K06178

23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]

Organism

vcr Vibrio cholerae O1 O395

Brite

KEGG Orthology (KO) [BR:vcr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vcr03009]
    VC395_1298
Enzymes [BR:vcr01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     VC395_1298
Ribosome biogenesis [BR:vcr03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    VC395_1298

SSDB

Motif

Pfam:

PseudoU_synth_2 S4

Other DBs

NCBI-ProteinID:

ACP09306

Position

I:1340751..1341716

AA seq 321 aa
MSEKLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKA
QEEVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTT
DGELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGIN
HTFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQVNYLR
ELVELRPEKETVLNMAPDAATRKRERTRSQKIRRAVRRHEERISATPGRSGKAPACRKPG
GESSTRNKVANQQQSSRKPRG

NT seq 966 nt +upstreamnt +downstreamnt
atgagcgaaaagttacaaaaagttttagcacgtgctggtcatggttctcgtcgtgagctt
gaagctctgatccgagctgggcgtgtaagtgttaatggcaaggtagctgtactgggcgaa
cgcctagaagatgataacgctgtcgtgcgcatcgatggacatgttgtgtctgtgaaagcg
caagaagaggtgatctgccgagttctggcttattacaaaccagaaggcgagctgtgtacc
cgtcatgatccagaaggtcgccgtacggtatttgaccgtctgccgaaaattcgtggttca
cgctggatttctgttggccgtttggacgccaacacgtcaggtttgctgctgtttaccacc
gatggtgaactggctaaccgtttaatgcacccaagccgtcaggtagaacgtgaatatctg
gttcgcgtctttggtgacgtgacggaagaaaaagttcgcaatctcgtacgtggtgtgcag
ctagaagatggtatggcgcgttttgaagatgtgatgtacgccggtggcgaaggcatcaac
catactttctacgtggtaatcaatgaaggtcgtaaccgtgaagtgcgtcgtctgtgggaa
tcacaaggtacgacagtaagccgtctgaagcgcgtacgttacggtgatattttcctcgac
aaaaaactgcctcgcggcggttggatggagcttgatctcaagcaagtgaactacctgcgt
gagttagtagaactgcgtccagagaaagaaacggtgctgaacatggcgcctgatgccgca
acgcgtaagcgtgagcgtacccgtagccagaaaattcgtcgtgcagtacgtcgtcacgaa
gagcgaatttcagctactccgggtcgtagtggaaaagcccctgcgtgccgtaagccgggt
ggtgaatcgagcacgcgcaataaagtggctaaccagcaacaaagctcgcgtaagccgcgc
ggataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

Download RDF

DBGET integrated database retrieval system