KEGG T02099: VC395

Vibrio cholerae O395: VC395_1659

Entry

VC395_1659 CDS T02099

Gene name

ligA-2

Definition

DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

vcr Vibrio cholerae O395

Pathway

vcr03410	Base excision repair
vcr03420	Nucleotide excision repair
vcr03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:vcr03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:vcr03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:vcr03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_OB_2 DNA_ligase_A_M

Other DBs

NCBI-GI:

227118004

NCBI-GeneID:

7775546

UniProt:

A5F7Z9

Position

I:complement(1740024..1740872)

AA seq 282 aa
MLIRLTLTAAAIMLAQQTLANDGPLAFIPITYANNYQHGIDIFDYWKSEKLDGIRAIWTG
KQLVTRNGNPIAAPAWFTESLPSYSLEGELWAGRGNFSLVQQTVLDSQPADSAWRKISLM
LFDMPDAAGDYSKRYYNLIHLVNSLDLKHIRYVEHTPIKSEAELLSYLDNISEKSGEGVM
LRKISARYQAGRSNDLLKLKRHQDAEATVIGYRLGMGKYKGKMGSMLVRTAEGLEFYIGS
GFSDVERAEPPKIGSVITYRYNGLTTEGKPRFARFVRVRENY

NT seq 849 nt +upstreamnt +downstreamnt
atgcttatacgactgacgctcaccgctgccgcgatcatgctggcccagcaaacgctggcc
aatgatgggccgctggcttttattccaattacttacgccaacaactaccaacacggcatt
gatattttcgattactggaaaagtgagaagcttgacggtatccgcgcgatttggacgggg
aaacaactggtcactcgtaacggtaaccctattgctgcccccgcttggtttaccgagtcg
ttaccctcttattcactcgaaggtgaattgtgggcagggcgcggcaatttctcactggta
cagcaaacggttttagatagccaaccggctgactccgcatggcgcaaaatcagcctaatg
ctgttcgatatgcctgatgcggcgggcgattacagtaagcgctattacaacctcatccat
ttggtgaatagccttgatctcaagcatatccgatatgtcgaacacaccccgataaaatct
gaggcggaactgctttcctaccttgataacatcagtgagaaatcgggggaaggggtaatg
ctgcgcaaaatcagcgctcgctatcaggcagggcgaagtaatgatttgttgaagctgaaa
aggcatcaggatgcagaagcaaccgtgattggttatcggctcggcatgggaaaatacaaa
ggtaaaatgggctctatgctggttcggaccgcagaggggctagaattttatatcggcagt
ggatttagtgatgtcgagcgcgccgagccgcccaagattggtagtgttatcacctaccgt
tacaacggacttacaacggaaggcaaaccaaggtttgcccgttttgttcgggtcagagaa
aactattga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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