KEGG   Vibrio cholerae O27 10432-62: VAB027_840
Entry
VAB027_840        CDS       T03829                                 
Name
(GenBank) hypothetical protein
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
vcz  Vibrio cholerae O27 10432-62
Pathway
vcz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vcz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VAB027_840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcz03019]
    VAB027_840
Enzymes [BR:vcz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     VAB027_840
Messenger RNA biogenesis [BR:vcz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     VAB027_840
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UTP25 AAA_22 CMS1 ERCC3_RAD25_C P-loop_SecA
Other DBs
NCBI-ProteinID: AKB05424
Position
897715..899109
AA seq 464 aa
MGFTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPIL
ELLAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLNSAVVFGGVKINPQMQRM
CKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIRKILKLLPEKRQ
NLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLVKE
GNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVAT
DIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAIER
LTQALLPRVNLAGFEPTNQLPESKLDTRPLKPKKPKKSKKVEGAGENKGSAAENKPKAGH
RGQPTGQARTAKKGGTHSAPKKPANRPRRSSSKPVTKSSSAKPI
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgggttttacctcgctcggtctgtctgcgccaatccttaaagctattgaagagaaagga
tacaacacgccttcaccgattcagttacaggctattcctgcggttttagcaggcaaagac
gtgatggccgcagctcaaactggcacaggaaaaacggctggctttacgctacccatttta
gaattgctggcaaaagggccaaaagttcgcgccaatcaagttcgtgctttaatccttacc
ccaacgcgtgaactggccgcacaaatccaagacaatgtcatgctctatggccgccatcta
ccgctcaatagcgcagttgtgtttggtggtgtgaaaattaacccacaaatgcagcgaatg
tgtaaaggtgcggatatcttagtggcaaccccaggccgcttaatggatctgtataaccaa
aatgcagtcaaatttgatcagttggaaattttggtacttgacgaagcagatcgcatgctc
gacatgggctttattcgtgacattcgtaagatactgaaattattgcctgaaaagcgccaa
aacctattgttttcagctaccttctcgaccgaaatccgtgagcttgccaaaggcttggtg
aataaccccgtcgaaatctcagtcagcccagccaactcaacggcaagaaccgttgagcag
tgcatttatcctgctgatgtgaaaaagaaaccggacatgctggtgaaattggtcaaagaa
gggaattggcaacaagtgctggtatttatgcgtaccaagcatggtgccaaccgcttagcg
acctatctcaacgagcaaggtttaaccgcggccgcgattcacggcaataagagccaaggc
gcacgcacccgtgcactggcggattttaaagcgggagaggtgcgtattctggtcgcaaca
gatattgcggcgcgtggcattgatatcccgcaactacctcaagtggtgaattttgaattg
ccgaaaattgctgaagattacgtgcaccgaattggccgaacaggccgtgcaggtgaagtc
ggtaaagcaatatccttggtaagtgccattgaagcgccggaattatttgccattgaacgt
ttaacgcaagccttactgccccgtgtaaatttagcgggatttgagccgaccaaccaactc
cctgagtcaaagttagacactcgacctttgaaaccgaaaaagcccaaaaaatctaaaaag
gtagagggagcaggagaaaacaaaggcagcgcagctgaaaacaaacctaaagctggccac
cgaggtcaacctacagggcaagctcgcacagcgaaaaaaggcggcactcattcagcgccg
aaaaaacccgcaaaccgccctcgtcgcagttcttcaaaaccagtgacaaagtcatcatca
gctaaaccgatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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