KEGG   Verticillium dahliae: VDAG_01247
Entry
VDAG_01247        CDS       T03450                                 
Name
(RefSeq) ATP-dependent RNA helicase HAS1
  KO
K13179  ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
Organism
vda  Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:vda00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vda03041]
    VDAG_01247
   03009 Ribosome biogenesis [BR:vda03009]
    VDAG_01247
Enzymes [BR:vda01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     VDAG_01247
Spliceosome [BR:vda03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    VDAG_01247
Ribosome biogenesis [BR:vda03009]
 Eukaryotic type
  90S particles
   Helicases
    VDAG_01247
  Pre-60S particles
    VDAG_01247
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII Nop14
Other DBs
NCBI-GeneID: 20702710
NCBI-ProteinID: XP_009648428
UniProt: G2WTX4
Position
1
AA seq 587 aa
MVDAASNKKRKLRDANGDKAAARKATEAPVAVSRKSKKQKQAKDAAEESEDNFESGSEEE
EQDEEDEDEDPEEAEANEEDVATAANDQDADLEIPNREALTLPPSGEEAQDFSQLNLSEK
TMKAIEGMGFTKMTEIQRRGIPPLLTGRDVLGAAKTGSGKTLAFLIPAIEMLSSLRFKPR
NGTGVIVVSPTRELALQIFGVARELMEHHSQTYGIVIGGANRRAEAEKLAKGVNLIIATP
GRLLDHLQNTPFVFKNLKTLIIDEADRILEIGFEDEMRQIVKILPSADRQTSLFSATQTT
KVEDLARISLRAGPLYINVDQTKEHSTVEGLEQGYVICDEDKRFLLLFSFLKRNLKKKVI
VFFSSCNSVKYHAELLNYIDLPVLSLHGKMKQQARTNTFFEFCNAKQGTLICTDVAARGL
DIPSVDWSVSFDPPDAPTDYIHRVGRTARANAKGKSLLFLHPSEVGFLSHLKAARVPVVE
FEFPASKVANIQALLEKLISQNYYLNKSAKDGYRSYLHAYASHSLRSVYDINKLDLAKLA
KSFGFAVPPRVDVTVGASGRDKKVQGRRTYGSQPRQNDRFRQKGRSG
NT seq 1764 nt   +upstreamnt  +downstreamnt
atggtcgacgccgcctccaacaagaagcgcaagctccgcgacgccaatggtgacaaggct
gctgcccgcaaggccactgaggctccggtagccgtctcccgaaagtcgaagaagcagaag
caggcgaaggacgctgccgaggagtctgaggacaacttcgagtctggcagcgaagaggag
gagcaagacgaggaggacgaggacgaagatcctgaagaggccgaagccaatgaggaagac
gtggcgaccgcagcaaacgaccaagatgccgacctggagatcccgaaccgcgaggccctg
accctgccaccctcgggcgaggaggcgcaggacttctcgcagctcaacctgtcggagaag
acgatgaaggcgatagagggcatggggttcacaaaaatgacggagattcagaggagaggt
atcccgcccctgctgacgggtcgcgatgtcctgggtgcggctaagacgggctccggcaag
acgcttgcgttcctgatacccgccatcgagatgctcagctcgctgcgcttcaagccccga
aacggaactggtgtcatcgtcgtgtcccccacccgcgaactcgccctgcagatcttcggc
gtcgcgcgcgagctcatggagcaccactctcagacctacggcatcgtcattggcggcgcc
aaccgccgtgctgaagccgagaagctcgccaagggcgtcaacctcatcatcgccacgccc
ggccgcctgctcgatcacctgcagaacacgccctttgtcttcaagaacctcaagaccctc
atcattgacgaggccgaccgcatcctcgagattggtttcgaggacgagatgcgccagatt
gtcaagatcctgcccagcgccgacaggcagacgtccctcttctcggcgacccagacgacc
aaggtggaggacctcgcgcggatatcgctccgcgccggaccgctgtacatcaacgtcgac
cagaccaaggagcacagcaccgtcgagggcctcgagcagggctacgtcatctgcgacgag
gacaagcgcttcctgctgctgttctccttcctgaagaggaacctgaagaagaaggtcatt
gtcttcttcagcagctgcaactcggtcaagtaccatgccgagctgctgaactacatcgac
ctccctgttctgagtcttcacggcaagatgaagcagcaggctcgcacgaacacctttttc
gagttctgcaatgccaagcagggcaccctcatctgcactgacgttgctgcccgtggcctt
gatatcccctccgtcgactggtccgtctcgttcgacccccctgatgcgcccaccgactac
attcaccgtgtcggccgtaccgcccgcgccaacgccaagggcaagtccctcctcttcctg
caccccagcgaggtgggcttcctgtcgcacctcaaggcggcgcgcgtgcccgtcgtcgag
tttgagttccccgccagcaaggtcgccaacatccaggccctcctcgagaagctcatcagc
cagaactactacctcaacaagtcggccaaggacggctaccgcagctacctgcacgcctac
gcgagccactcgctgcgctccgtctacgacataaacaagctcgacctcgccaagctcgcc
aagagcttcggctttgccgtccccccgcgcgtcgacgtcacggtcggcgccagcgggcgg
gacaagaaggtccagggcaggaggacgtacggcagccagccgaggcagaatgaccgcttc
aggcagaagggccggtccggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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