KEGG   Verticillium dahliae: VDAG_01612
Entry
VDAG_01612        CDS       T03450                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
vda  Verticillium dahliae
Pathway
vda03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    VDAG_01612
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vda03000]
    VDAG_01612
   03021 Transcription machinery [BR:vda03021]
    VDAG_01612
Transcription factors [BR:vda03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    VDAG_01612
Transcription machinery [BR:vda03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     VDAG_01612
  RNA polymerase III system
    TFIIIB
     VDAG_01612
  RNA polymerase I system
    SL1/TIF-1B
     VDAG_01612
SSDB
Motif
Pfam: TBP DUF4295
Other DBs
NCBI-GeneID: 20703075
NCBI-ProteinID: XP_009648793
UniProt: G2WSL6
Position
1
AA seq 249 aa
METSNITTHPTTVEQAKAFTAPGSLSFPGGAQEFAPLAPNGQVNNQQVANGNGVTPATPA
ATPGALVGGSGLTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKT
TALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIR
LEGLASRHHNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIY
PVLQDFRKV
NT seq 750 nt   +upstreamnt  +downstreamnt
atggagacctccaacataaccactcatcccaccacggttgagcaggccaaggccttcact
gcgcccggctctctgtccttccccggcggcgcccaggagtttgctcccctggctcccaac
ggtcaggtcaacaaccagcaggtcgcaaacggcaatggggtgactcccgcgacccccgct
gcgacgcctggtgccttggtgggcggtagtggcctcacacccacgcttcagaacatcgtt
gccacggtcaatctcgattgccgcctggacctcaagacgattgccctgcacgcgaggaat
gccgagtacaaccccaagcgtttcgccgctgttatcatgcgtatccgcgagcccaagacg
accgcgctgatcttcgcctctggcaagatggtcgtcactggtgccaagtccgaggatgac
tcgaagcttgcctcgcgcaagtacgctcgcatcatccagaagctcggcttcaacgcaaag
tttaccgactttaagattcagaacattgtcggctcgtgcgacattaagttccccattcgt
ctcgaaggtctggcgtcccgccatcacaacttcagctcctacgagcctgagttgttccct
ggtctcatctaccgcatgatcaagccgaagattgtgctcctcatcttcgtcagcggcaag
attgttctcacgggcgccaaagtccgtgaggagatttaccaggcctttgagatgatctac
cccgtgctgcaggatttccgcaaggtctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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