KEGG   Verticillium dahliae: VDAG_03656
Entry
VDAG_03656        CDS       T03450                                 
Name
(RefSeq) pectin lyase B
  KO
K01732  pectin lyase [EC:4.2.2.10]
Organism
vda  Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:vda00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    VDAG_03656
Enzymes [BR:vda01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.10  pectin lyase
     VDAG_03656
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 20705119
NCBI-ProteinID: XP_009652035
UniProt: G2X1P5
Position
3
AA seq 415 aa
MFKLRSQSIRSLFIHFLASVIALVSRFVASKVSNMHFTTIVLLVGAPTLSFAQVVGKAYG
FAAGVTGGGSATPAVPKDIAQLKSWLGDDTPRVIRIDKTFNFIGSEGSVTEMGCRNKNVC
TFLNGGQDWIKPDCDSEQTPVQVTYDKAGTVGIIVGSNKSIVGVGNKGVLHGKGLRLKQG
ASNVIIQNLHIDNLNPQHIWGGDGISLEGQNNGVWIDHNKFTRVGRQIFDANTATLSNNE
FDGKTSYSRTCNNKHYWTIMMVGKLDKITFDKNYLHDVSGRAPKIGSESGTQIIQAVNNY
YNYNTGHAFDISFAGARVLIEGNRLENQPQPMTPASSTGKVYNVPDDASRTNCASYLGRN
CEINAITASGAITARKDNSVLTELGKYKANLVQPLRYGDVKGHVLANYGVGRIGN
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgttcaagcttcgttcccagtccattcgctctctttttattcatttcttggcatccgtc
attgcacttgtttcccgtttcgttgcatccaaggtctcaaatatgcacttcaccacaatt
gtgctcctcgttggagcgccaactttgtcctttgcccaggtcgttggcaaggcctacggc
ttcgctgcaggcgtcactggcggcgggtccgctacgcctgctgtccccaaggacattgcc
cagctcaagtcatggctcggggatgataccccccgcgtgattcgcattgacaagaccttc
aacttcatcggctccgagggaagcgtcaccgagatgggctgccgcaacaagaatgtctgc
acgttcctcaacggcggccaggactggatcaagcccgactgcgacagcgagcagacccct
gttcaggtcacgtacgacaaggctggcacggtgggcatcatcgtcggcagcaacaagtcg
attgttggtgttgggaacaagggcgtcctgcacggcaagggtctgcgtctgaagcagggg
gcctcgaatgtcatcatccagaacctccacattgataacctgaacccccagcacatttgg
ggtggcgatggcatcagccttgagggtcagaacaacggtgtctggatcgaccacaacaag
ttcacacgcgttggtcgccagatcttcgatgccaacacggccactctctcgaacaacgag
ttcgacggcaagaccagctactcccgtacctgcaacaacaagcactactggaccatcatg
atggtcggcaagctcgacaagatcaccttcgacaagaactacctccacgacgtctcgggt
cgcgcccccaagattggctccgagtccggcacccagatcatccaggccgtcaacaactat
tacaactacaacaccggacacgcctttgacatctcgtttgctggcgcccgcgtcctcatc
gagggcaatcgcctcgagaaccagccgcagcccatgaccccggccagcagcaccggcaaa
gtctacaacgttcccgacgacgcgtcacgcaccaactgcgcatcctacctcggccgcaac
tgcgagatcaacgccatcaccgcgtcgggcgctatcacggcacgcaaggacaacagtgtg
ctgaccgagcttggtaagtacaaggccaaccttgtgcagcctctgcgttacggtgacgtc
aagggtcacgtccttgcgaactacggtgttggtcgcattggaaactag

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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