KEGG   Verticillium dahliae: VDAG_10442
Entry
VDAG_10442        CDS       T03450                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
vda  Verticillium dahliae
Pathway
vda03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    VDAG_10442
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vda03009]
    VDAG_10442
Ribosome biogenesis [BR:vda03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    VDAG_10442
SSDB
Motif
Pfam: Utp21 WD40 ANAPC4_WD40 NBCH_WD40 Nup160 Cytochrom_D1
Other DBs
NCBI-GeneID: 20711905
NCBI-ProteinID: XP_009657999
UniProt: G2XJW0
Position
Unknown
AA seq 1042 aa
MPHSDSDGPLSKRQKLNVAAKDVATSEQASRIFAPFRTVGLVSPTNVPFTSIPLGKTTYQ
VTTSVGRALQTYDLKRGLNLVFVTRPQTPADITATCAWKEKVFVAWGDRSRGEDQGLWAF
HRGRRSEELELPADLDEPIKQILIFGSWMVGCATTRLEIWKTSTLEHYTTLHTLATKKGD
NEITGGVTNMPTYLNKIFVGRKDGWVEIWNVSTGKLIYTILPPSPDCGSVTCLQPSPALS
LLAIAYSKGPLVVHNILTDKSIIQVNAGNEYEPVNAISFRTDGMGAGHDGRKDGVMATAT
AATGDVTFWDLNHGGRVMGVLRSAHNPPVEEGAKVRGGVSKIEFLSGQPVIVTSGMDNSL
KTWMFDESPFSPIPRILHQRSGHAAPVKCLQFLPTDFDGAEAGNKWLLSGGQDRSLWGWS
LRRDGQSTELSQGNIRKQAKKHGILSTRALAHGPTTSLEDLKAPEITCIASSLNRDGGIG
AIPGKQPIWQKRRDNKAQRLDAEISGMTGWESVVTAHVDDSFARTWFWGRKKAGRWAFPT
GDGAHVSTVAISPCGTFALVGSVEGGIDMYNLQSGIHRQRFPAKLTPAQAREIRIQQLKT
GDDSIQVAGGGFLQGTGRHIKAVTGIIVDSMNKHIVSCSLDGKIKFWDFLTGRLLQQIDW
APMVGITGGRYHAGNDLLVFACDDLSIRVVDLETKKTIREFWGCEGKINDFCFSNDGRWV
IAASDDSVIRVWDLPTSHLIDAIRLEKPCTALAMSSTGEFLAATVQGELGVTLWTNKTLY
KHVPTRQISEKEVGTTTMPTASGEGSKGLVEAAFDDEAEPEEDDPTVAPAIDQLSSDMMT
LSLVPKSRWQTLLHLDLIKQRNKPTEAPKVPEKAPFFLPSTSGGKPAPALEGAADTAPES
TSRITKHELGRVQEIFTSRLMDGAVSGDYVDFIEHLKSLSPSTADLELRSLSIGDMSGNE
TNGLVHFIKALTSRLKSRRDYELTQAWMTVFLRLHFDIVMENEASLAALQEWKVMQESEC
ARLDGLVGYCSGVVGFLRSPRT
NT seq 3129 nt   +upstreamnt  +downstreamnt
atgcctcactcggacagcgacggccctctgagcaagaggcagaagctcaatgttgccgcc
aaagatgtggccacttcagaacaggcgtcacgcatttttgcccccttcagaacagtcggc
ctggtctctcctaccaatgtcccattcacctcgatacccctcggaaagaccacctatcaa
gtgaccacctctgttggccgagcattgcagacttacgacttgaagaggggccttaatctc
gtcttcgtcacgcgccctcagacccccgccgacatcaccgccacatgtgcctggaaggaa
aaggttttcgtcgcatggggcgaccgaagccgaggagaagaccaaggcctgtgggccttc
catcgcggtcgaaggtccgaagaactggagcttcccgctgatctcgacgaacccatcaag
cagatcttgatctttggttcctggatggtcggatgcgcgaccacgaggctcgaaatctgg
aagacctcaacgttggaacattacacgacgcttcacaccctagccaccaagaagggcgat
aacgagatcaccggaggtgtcaccaacatgcctacatacctcaacaaaatttttgtcggc
cgcaaggatggctgggtggagatatggaacgtgagcaccggcaagctcatctatactatc
cttccaccctcgcccgactgtggctcggtcacctgcttgcaaccttctccggcgctgtct
cttctcgccattgcttattcgaagggcccgctagtcgtccacaatatccttaccgacaaa
tcgatcattcaagtcaatgccggcaacgaatatgaacccgttaatgcaatctcgttccgc
accgacggtatgggcgcaggccacgatggacgtaaagacggtgtcatggccaccgccact
gctgccactggcgatgtcactttctgggatctgaaccacggtggcagagtcatgggtgtg
ctgcgtagcgcccacaaccctccggtcgaggaaggagccaaggtccgtggcggcgtgagc
aagattgagtttttatccggccagcccgtcattgtgacgagcggtatggacaactcgctc
aaaacctggatgtttgacgagtcccccttctctccgatccctcgaatccttcaccagcga
agtggtcatgcggcgcccgtcaagtgcctgcagttcctgcccactgactttgacggcgcg
gaagccggaaacaaatggctgctcagtggtggccaggatcgaagcctgtggggttggagt
ctgcgacgcgacggccagagtacggaactgagccaaggcaatattcgcaagcaagccaag
aagcacgggatcctgtcaacgcgagccttggcccatggccctactacaagtctagaggat
ctcaaggcgccggaaatcacttgcattgcaagctcgctcaaccgcgacggtggcattgga
gccattcccggcaagcagcctatctggcagaagcgcagggacaacaaggcacaaaggctc
gacgccgagatcagtggcatgacgggctgggagagcgttgttacggctcacgttgacgat
tcattcgcccgcacttggttctggggtcgaaagaaggctggccgctgggcgttccccacg
ggcgatggtgctcacgtctcgacggtcgccatcagcccctgtggcacgtttgctctggtc
ggttccgtcgaaggtggcattgacatgtacaaccttcagtccggcatccaccgacaacgc
tttccggcaaagcttactcccgcacaggcgcgagagatcaggatccagcagctcaaaaca
ggcgacgactcgatccaggttgccggcggaggctttttgcaaggaacaggccgccacatc
aaagctgtcaccggcatcattgttgattccatgaacaagcacattgtctcctgttccctg
gatggcaagatcaagttctgggactttttgacgggcaggctgcttcagcaaatcgattgg
gcaccaatggtcggcataaccggaggacgttaccacgccggtaacgatttgcttgtgttc
gcctgtgacgacctttccatccgagttgtggatctcgagaccaagaaaacaatccgcgag
ttctggggttgtgagggcaagatcaacgacttctgcttctcaaatgacggccgctgggtt
attgccgcatccgacgactcggtgatcagagtctgggatctccccacaagccatctgatt
gacgccattcgcctggaaaagccttgcaccgccctggccatgtccagcaccggcgagttc
ttggcggctactgtccagggtgagctcggtgtgacgctttggacaaacaaaaccctgtac
aaacatgttccgacgagacaaatttccgagaaggaggtgggcacaacgactatgccgacc
gcgtcaggcgaaggcagcaagggccttgtcgaggcagcatttgatgacgaggccgagccc
gaagaagacgatcctaccgtggcaccggcgatcgatcaactcagttctgacatgatgacc
ctgagtttggtgccgaagagccgctggcagacattgctccacctcgacctcatcaagcaa
cgtaacaagcccaccgaggctcccaaggtgccggagaaggcgcccttcttccttccctcg
accagcggcggcaagcctgcgcctgccctcgagggtgcggcagacacggcacccgaatcc
acgtcccggatcacgaagcacgagcttggacgcgtgcaggagatcttcaccagtaggctg
atggatggcgccgtctccggagactacgttgacttcatcgaacacttgaaatcgttatct
ccttcaacggcagacctcgagctccgctccctgtcaattggtgacatgagcggcaacgaa
accaacggtttggtacacttcatcaaggctttgacaagccgtctcaagtcccgtcgggac
tatgagctgacgcaggcgtggatgactgtattcctgaggctgcactttgacattgtcatg
gagaacgaggcgtcgctggcggcgctgcaagagtggaaggtcatgcaggaaagcgagtgc
gctcgcttggatgggctggttgggtactgcagtggtgtcgtgggtttcctgaggagtccg
aggacatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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