KEGG   Vibrio sp. EJY3: VEJY3_00885Help
Entry
VEJY3_00885       CDS       T01683                                 

Definition
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
vej  Vibrio sp. EJY3
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:vej00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    VEJY3_00885
Enzymes [BR:vej01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     VEJY3_00885
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     VEJY3_00885
DNA repair and recombination proteins [BR:vej03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     VEJY3_00885
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
Position
1:202392..203201
Genome map
AA seq 269 aa AA seqDB search
MPELPEVEVSRMGITPHMLDQTIQAFVFRTPKLRWDIPQELKQLEGQVIRAIRRRAKYLL
IETDKGTAIVHLGMSGSLRVLDADFPPAKHDHVDLKLTNGKVLRYNDPRRFGAWLWCAPG
ESHTVLDHMGPEPLTDEFNAEYVAEKAQGKRVAVKQFIMDNKVVVGVGNIYANESLFKSR
IHPTRPTGQVTAEEWKLLVTNIKATLEIAINQGGTTLKDFAQADGKPGYFAQELLVYGKA
GEPCPECGEPLQEQKIGQRNTFFCEECQK
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacctgaagtcgaagtcagccgtatgggaatcacgccgcatatgcttgat
caaacgatccaggcgtttgtgtttcgtacccccaaactacgctgggatatcccccaggaa
ctgaaacagcttgaagggcaagtgattcgtgcaatccggcgccgtgctaagtacctgttg
attgagacggataagggaaccgcgattgttcatctgggtatgtcaggctcgctacgtgtg
cttgatgccgattttccaccggctaaacatgatcatgtggatctgaagctgactaatggc
aaagtactgcgctacaacgacccgcgtcgatttggagcgtggttatggtgcgcgccgggt
gagtctcacaccgtacttgatcatatggggccagagccgttgactgacgaattcaatgct
gagtatgtggcagaaaaagcgcaaggcaagcgtgttgctgtaaagcagttcattatggac
aacaaagtcgtggtcggcgttggtaatatctacgcgaatgaatccctgtttaaatctcgg
atccatccaaccagacctacgggtcaagtgacggcagaagagtggaagttactggttacc
aacattaaagctactcttgaaatcgcaatcaaccaaggcggtaccactctcaaggatttt
gcacaggcagacggtaaacctggatactttgcccaggaactattggtttatggaaaagca
ggagagccttgccctgaatgcggtgagccacttcaagagcaaaagattggtcagcgtaat
actttcttttgtgaggaatgccagaagtaa

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